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PDBsum entry 1t5o

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protein Protein-protein interface(s) links
Translation PDB id
1t5o

 

 

 

 

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Contents
Protein chains
340 a.a. *
Waters ×1398
* Residue conservation analysis
PDB id:
1t5o
Name: Translation
Title: Crystal structure of the translation initiation factor eif-2b, subunit delta, from a. Fulgidus
Structure: Translation initiation factor eif2b, subunit delta. Chain: a, b, c, d. Synonym: eif2bd
Source: Archaeoglobus fulgidus. Organism_taxid: 224325. Strain: dsm 4304. Other_details: gene eif2bd
Biol. unit: Dimer (from PQS)
Resolution:
1.90Å     R-factor:   0.197     R-free:   0.246
Authors: V.N.Malashkevich,S.C.Almo,S.K.Burley,New York Sgx Research Center For Structural Genomics (Nysgxrc)
Key ref: V.N.Malashkevich and s.c.almo Crystal structure of the translation initiation factor eif-2b, Subunit delta, From a. Fulgidus. To be published, .
Date:
04-May-04     Release date:   31-Aug-04    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
O29877  (MTNA_ARCFU) -  Putative methylthioribose-1-phosphate isomerase from Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Seq:
Struc:
339 a.a.
340 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.5.3.1.23  - S-methyl-5-thioribose-1-phosphate isomerase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: 5-(methylsulfanyl)-alpha-D-ribose 1-phosphate = 5-(methylsulfanyl)-D- ribulose 1-phosphate
S-methyl-5-thio-alpha-D-ribose 1-phosphate
= 5-(methylsulfanyl)ribulose 1-phosphate
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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