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PDBsum entry 1lmm
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DOI no:
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Protein Sci
12:1332-1343
(2003)
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PubMed id:
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Recombinant production and solution structure of PcTx1, the specific peptide inhibitor of ASIC1a proton-gated cation channels.
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P.Escoubas,
C.Bernard,
G.Lambeau,
M.Lazdunski,
H.Darbon.
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ABSTRACT
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Acid-sensing ion channels (ASICs) are thought to be important ion channels,
particularly for the perception of pain. Some of them may also contribute to
synaptic plasticity, learning, and memory. Psalmotoxin 1 (PcTx1), the first
potent and specific blocker of the ASIC1a proton-sensing channel, has been
successfully expressed in the Drosophila melanogaster S2 cell recombinant
expression system used here for the first time to produce a spider toxin. The
recombinant toxin was identical in all respects to the native peptide, and its
three-dimensional structure in solution was determined by means of (1)H 2D NMR
spectroscopy. Surface characteristics of PcTx1 provide insights on key
structural elements involved in the binding of PcTx1 to ASIC1a channels. They
appear to be localized in the beta-sheet and the beta-turn linking the strands,
as indicated by electrostatic anisotropy calculations, surface charge
distribution, and the presence of residues known to be implicated in channel
recognition by other inhibitor cystine knot (ICK) toxins.
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Selected figure(s)
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Figure 4.
Figure 4. (A) Stereoview of the best fit of 20 solution
structures of PcTx1. C[ ]are shown.
The N and C termini are labeled "N" and "C". (B) Molecular
surface colored according to the electrostatic charge (red for
acidic and blue for basic) and the resulting dipolar moment (red
arrow). The aromatic residues are indicated and colored in
purple. (C) CPK representation of the proposed functional
surface of PcTx1. The residues suspected to be important for the
interaction of the toxin with the channel are labeled. Residues
are colored as follows: green for polar uncharged residues, blue
for basic residues, red for acidic residues, purple for aromatic
residues, and yellow for aliphatic residues.
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Figure 6.
Figure 6. Comparison of putative functional dyads of PcTx1
(A) and related ICK toxins J-atracotoxin Hv1c (PDB 1DL0 [PDB]
; B), -conotoxin
PVIIA (PDB 1KCP [PDB]
; C), and agitoxin 2 (PDB 1AGT [PDB]
; D). Basic residues side chains are colored in blue; aromatic
residues side chains, in orange.
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The above figures are
reprinted
by permission from the Protein Society:
Protein Sci
(2003,
12,
1332-1343)
copyright 2003.
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Figures were
selected
by an automated process.
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Literature references that cite this PDB file's key reference
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PubMed id
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Reference
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I.Baconguis,
and
E.Gouaux
(2012).
Structural plasticity and dynamic selectivity of acid-sensing ion channel-spider toxin complexes.
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Nature,
489,
400-405.
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PDB codes:
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A.H.Kwan,
M.Mobli,
P.R.Gooley,
G.F.King,
and
J.P.Mackay
(2011).
Macromolecular NMR spectroscopy for the non-spectroscopist.
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FEBS J,
278,
687-703.
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I.Vetter,
J.L.Davis,
L.D.Rash,
R.Anangi,
M.Mobli,
P.F.Alewood,
R.J.Lewis,
and
G.F.King
(2011).
Venomics: a new paradigm for natural products-based drug discovery.
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Amino Acids,
40,
15-28.
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S.Gründer,
and
X.Chen
(2010).
Structure, function, and pharmacology of acid-sensing ion channels (ASICs): focus on ASIC1a.
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Int J Physiol Pathophysiol Pharmacol,
2,
73-94.
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T.Ohbuchi,
K.Sato,
H.Suzuki,
Y.Okada,
G.Dayanithi,
D.Murphy,
and
Y.Ueta
(2010).
Acid-sensing ion channels in rat hypothalamic vasopressin neurons of the supraoptic nucleus.
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J Physiol,
588,
2147-2162.
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J.L.Lahti,
A.P.Silverman,
and
J.R.Cochran
(2009).
Interrogating and predicting tolerated sequence diversity in protein folds: application to E. elaterium trypsin inhibitor-II cystine-knot miniprotein.
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PLoS Comput Biol,
5,
e1000499.
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P.Escoubas,
and
G.F.King
(2009).
Venomics as a drug discovery platform.
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Expert Rev Proteomics,
6,
221-224.
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Y.J.Qadri,
B.K.Berdiev,
Y.Song,
H.L.Lippton,
C.M.Fuller,
and
D.J.Benos
(2009).
Psalmotoxin-1 docking to human acid-sensing ion channel-1.
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J Biol Chem,
284,
17625-17633.
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S.Becker,
and
H.Terlau
(2008).
Toxins from cone snails: properties, applications and biotechnological production.
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Appl Microbiol Biotechnol,
79,
1-9.
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P.Escoubas
(2006).
Molecular diversification in spider venoms: a web of combinatorial peptide libraries.
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Mol Divers,
10,
545-554.
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X.Chen,
H.Kalbacher,
and
S.Gründer
(2006).
Interaction of acid-sensing ion channel (ASIC) 1 with the tarantula toxin psalmotoxin 1 is state dependent.
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J Gen Physiol,
127,
267-276.
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B.Chagot,
P.Escoubas,
S.Diochot,
C.Bernard,
M.Lazdunski,
and
H.Darbon
(2005).
Solution structure of APETx2, a specific peptide inhibitor of ASIC3 proton-gated channels.
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Protein Sci,
14,
2003-2010.
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PDB code:
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X.Chen,
H.Kalbacher,
and
S.Gründer
(2005).
The tarantula toxin psalmotoxin 1 inhibits acid-sensing ion channel (ASIC) 1a by increasing its apparent H+ affinity.
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J Gen Physiol,
126,
71-79.
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X.Z.Zeng,
Q.Zhu,
and
S.P.Liang
(2005).
Sequence-specific assignment of 1H-NMR resonance and determination of the secondary structure of Jingzhaotoxin-I.
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Acta Biochim Biophys Sin (Shanghai),
37,
567-572.
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B.Chagot,
P.Escoubas,
E.Villegas,
C.Bernard,
G.Ferrat,
G.Corzo,
M.Lazdunski,
and
H.Darbon
(2004).
Solution structure of Phrixotoxin 1, a specific peptide inhibitor of Kv4 potassium channels from the venom of the theraphosid spider Phrixotrichus auratus.
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Protein Sci,
13,
1197-1208.
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PDB code:
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S.Diochot,
A.Baron,
L.D.Rash,
E.Deval,
P.Escoubas,
S.Scarzello,
M.Salinas,
and
M.Lazdunski
(2004).
A new sea anemone peptide, APETx2, inhibits ASIC3, a major acid-sensitive channel in sensory neurons.
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EMBO J,
23,
1516-1525.
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The most recent references are shown first.
Citation data come partly from CiteXplore and partly
from an automated harvesting procedure. Note that this is likely to be
only a partial list as not all journals are covered by
either method. However, we are continually building up the citation data
so more and more references will be included with time.
Where a reference describes a PDB structure, the PDB
codes are
shown on the right.
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}
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