spacer
spacer

PDBsum entry 1dm7

Go to PDB code: 
protein ligands metals Protein-protein interface(s) links
Oxidoreductase PDB id
1dm7

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chains
416 a.a. *
Ligands
ACT ×2
CAC ×2
HEM ×2
HRG ×2
GOL ×5
Metals
_ZN
Waters ×409
* Residue conservation analysis
PDB id:
1dm7
Name: Oxidoreductase
Title: Bovine endothelial nitric oxide synthase heme domain complexed with homoarginine (h4b free)
Structure: Nitric oxide synthase. Chain: a, b. Fragment: heme domain. Engineered: yes
Source: Bos taurus. Cattle. Organism_taxid: 9913. Cell: endothelial. Expressed in: escherichia coli. Expression_system_taxid: 562
Biol. unit: Dimer (from PQS)
Resolution:
2.10Å     R-factor:   0.231     R-free:   0.273
Authors: C.S.Raman,H.Li,P.Martasek,G.J.Southan,B.S.S.Masters,T.L.Poulos
Key ref: C.S.Raman et al. Crystal structures of bovine endothelial nitric oxide synthase heme domain complexed with various inhibitors. To be published, .
Date:
13-Dec-99     Release date:   13-Dec-00    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
P29473  (NOS3_BOVIN) -  Nitric oxide synthase 3 from Bos taurus
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1205 a.a.
416 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.1.14.13.39  - nitric-oxide synthase (NADPH).
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: 2 L-arginine + 3 NADPH + 4 O2 + H+ = 2 L-citrulline + 2 nitric oxide + 3 NADP+ + 4 H2O
2 × L-arginine
+
3 × NADPH
Bound ligand (Het Group name = HRG)
matches with 56.25% similarity
+ 4 × O2
+ H(+)
= 2 × L-citrulline
+ 2 × nitric oxide
+ 3 × NADP(+)
+ 4 × H2O
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

spacer

spacer