› 8bso

X-ray diffraction
1.92Å resolution

crystal structure of antibody Fab with SiaLac-amidine-Lys

Released:
DOI: 10.2210/pdb8bso/pdb
PDB entry 8bso coloured by chain, front view.
PDB entry 8bso coloured by chain, side view.
PDB entry 8bso coloured by chain, top view.
Source organism: Mus musculus
Entry authors: Moynie L, Naismith JH

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-230509 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (3 distinct):
BAR-1 Fab heavy chain Chains: C, H
Molecule details ›
Chains: C, H
Length: 227 amino acids
Theoretical weight: 23.93 KDa
Source organism: Mus musculus
Expression system: Homo sapiens
BAR-1 Fab light chain Chains: D, L
Molecule details ›
Chains: D, L
Length: 219 amino acids
Theoretical weight: 24.1 KDa
Source organism: Mus musculus
Expression system: Homo sapiens

Ligands and Environments

Carbohydrate polymer : NEW Components: BGC, GAL, SIA
Carbohydrate polymer
2 bound ligands:
Ligand GOL 4 x GOL
Ligand SL9 2 x SL9
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I24
Spacegroup: C2
Unit cell:
a: 117.688Å b: 130.251Å c: 77.693Å
α: 90° β: 123.77° γ: 90°
R-values:
R R work R free
0.182 0.18 0.22
Expression system: Homo sapiens

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