› 6vu7

X-ray diffraction
2.59Å resolution

Crystal structure of YbjN, a putative transcription regulator from E. coli

Released:
DOI: 10.2210/pdb6vu7/pdb
PDB entry 6vu7 coloured by chain, front view.
PDB entry 6vu7 coloured by chain, side view.
PDB entry 6vu7 coloured by chain, top view.
Source organism: Escherichia coli 55989
Entry authors: Stogios PJ, Evdokimova E, Di Leo R, Savchenko A, Joachimiak A, Satchell KJF, Center for Structural Genomics of Infectious Diseases (CSGID)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-110511 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
YbjN protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 158 amino acids
Theoretical weight: 17.68 KDa
Source organism: Escherichia coli 55989
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: B7LD46 (Residues: 1-158; Coverage: 100%)
Gene names: EC55989_0898, ybjN
Sequence domains: Putative bacterial sensory transduction regulator

Ligands and Environments

1 bound ligand:
Ligand CL 2 x CL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU
Spacegroup: P21
Unit cell:
a: 54.462Å b: 110.891Å c: 59.924Å
α: 90° β: 116.708° γ: 90°
R-values:
R R work R free
0.24 0.238 0.295
Expression system: Escherichia coli BL21(DE3)

Quick links