› 5kvj

X-ray diffraction
2.26Å resolution

Crystal structure of the 16-mer doublestranded RNA. Northeast Structural Genomics Consortium (NESG) target RNA1

Released:
DOI: 10.2210/pdb5kvj/pdb
PDB entry 5kvj coloured by chain, front view.
PDB entry 5kvj coloured by chain, side view.
PDB entry 5kvj coloured by chain, top view.
Source organism: synthetic construct
Entry authors: Vorobiev SM, Ma L-C, Montelione GT, Northeast Structural Genomics Consortium (NESG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196943 (preferred)
Entry contents:
2 distinct RNA molecules
Macromolecules (2 distinct):
RNA (5'-R(P*CP*CP*AP*UP*CP*CP*UP*CP*UP*AP*CP*AP*GP*GP*CP*G)-3') Chain: A
Molecule details ›
Chain: A
Length: 16 nucleotides
Theoretical weight: 5.03 KDa
Source organism: synthetic construct
Expression system: Not provided
RNA (5'-R(P*CP*GP*CP*CP*UP*GP*UP*AP*GP*AP*GP*GP*AP*UP*GP*G)-3') Chain: B
Molecule details ›
Chain: B
Length: 16 nucleotides
Theoretical weight: 5.19 KDa
Source organism: synthetic construct
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand ARG 1 x ARG
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU MICROMAX-007
Spacegroup: R3
Unit cell:
a: 43.299Å b: 43.299Å c: 124.441Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.196 0.194 0.233
Expression system: Not provided

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