5zrz

X-ray diffraction
1.89Å resolution

Crystal Structure of EphA5/SAMD5 Complex

Released:

Function and Biology Details

Reaction catalysed:
ATP + a [protein]-L-tyrosine = ADP + a [protein]-L-tyrosine phosphate
Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-174866 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Ephrin type-A receptor 5 Chain: A
Molecule details ›
Chain: A
Length: 80 amino acids
Theoretical weight: 8.77 KDa
Source organism: Mus musculus
Expression system: Escherichia coli
UniProt:
  • Canonical: Q60629 (Residues: 799-876; Coverage: 9%)
Gene names: Bsk, Ehk1, Epha5
Sequence domains: SAM domain (Sterile alpha motif)
Structure domains: Transcription Factor, Ets-1
Sterile alpha motif domain-containing protein 5 Chain: B
Molecule details ›
Chain: B
Length: 70 amino acids
Theoretical weight: 7.92 KDa
Source organism: Mus musculus
Expression system: Escherichia coli
UniProt:
  • Canonical: Q3V1H9 (Residues: 1-66; Coverage: 38%)
Gene name: Samd5
Sequence domains: SAM domain (Sterile alpha motif)
Structure domains: Transcription Factor, Ets-1

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U1
Spacegroup: C2
Unit cell:
a: 98.195Å b: 29.651Å c: 54.17Å
α: 90° β: 109.95° γ: 90°
R-values:
R R work R free
0.196 0.194 0.234
Expression system: Escherichia coli