› 4pqx

X-ray diffraction
2.39Å resolution

Crystal structure of a NigD-like protein (BACCAC_02139) from Bacteroides caccae ATCC 43185 at 2.39 A resolution

Released:
DOI: 10.2210/pdb4pqx/pdb
PDB entry 4pqx coloured by chain, front view.
PDB entry 4pqx coloured by chain, side view.
PDB entry 4pqx coloured by chain, top view.
Source organism: Bacteroides caccae ATCC 43185
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-241397 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Uncharacterized protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 217 amino acids
Theoretical weight: 25.5 KDa
Source organism: Bacteroides caccae ATCC 43185
Expression system: Escherichia coli
Structure domains:

Ligands and Environments

3 bound ligands:
Ligand EDO 16 x EDO
Ligand IPA 5 x IPA
Ligand GOL 1 x GOL
1 modified residue:
Ligand MSE 12 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: P212121
Unit cell:
a: 51.673Å b: 143.419Å c: 143.022Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.188 0.186 0.222
Expression system: Escherichia coli

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