4o6c

X-ray diffraction
2.75Å resolution

West Nile Virus Non-structural protein 1 (NS1) Form 2 crystal

Released:

Function and Biology Details

Reactions catalysed:
S-adenosyl-L-methionine + a 5'-(5'-triphosphoguanosine)-[mRNA] = S-adenosyl-L-homocysteine + a 5'-(N(7)-methyl 5'-triphosphoguanosine)-[mRNA]
S-adenosyl-L-methionine + a 5'-(N(7)-methyl 5'-triphosphoguanosine)-(ribonucleotide)-[mRNA] = S-adenosyl-L-homocysteine + a 5'-(N(7)-methyl 5'-triphosphoguanosine)-(2'-O-methyl-ribonucleotide)-[mRNA]
Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)
Selective hydrolysis of -Xaa-Xaa-|-Yaa- bonds in which each of the Xaa can be either Arg or Lys and Yaa can be either Ser or Ala.
NTP + H(2)O = NDP + phosphate
ATP + H(2)O = ADP + phosphate
Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
PDBe Complex ID:
PDB-CPX-192979 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Non-structural protein 1 Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 377 amino acids
Theoretical weight: 42.61 KDa
Source organism: West Nile virus
Expression system: Trichoplusia ni
UniProt:
  • Canonical: Q9Q6P4 (Residues: 774-774, 791-1143; Coverage: 10%)
Gene names: GP1, MZ11_60484gpGP1, MZ11_60553gpGP1
Sequence domains: Flavivirus non-structural Protein NS1

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 23-ID-D
Spacegroup: P3
Unit cell:
a: 186.885Å b: 186.885Å c: 81.765Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.217 0.215 0.232
Expression system: Trichoplusia ni