Function and Biology

Crystal structure of Pseudomonas aeruginosa Hfq in complex with ADPNP

Source organism: Pseudomonas aeruginosa
Biochemical function: RNA binding
Biological process: regulation of translation, ncRNA-mediated
Cellular component: cytosol

Sequence family

Pfam Protein family (Pfam)
PF17209
Domain description: Hfq protein
Occurring in:
  1. RNA-binding protein Hfq
The deposited structure of PDB entry 3qui contains 6 copies of Pfam domain PF17209 (Hfq protein) in RNA-binding protein Hfq. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR005001
Domain description: RNA-binding protein Hfq
Occurring in:
  1. RNA-binding protein Hfq
IPR047575
Domain description: Sm domain
Occurring in:
  1. RNA-binding protein Hfq
IPR010920
Domain description: LSM domain superfamily
Occurring in:
  1. RNA-binding protein Hfq

Structure domain

CATH CATH domain
2.30.30.100
Class: Mainly Beta
Architecture: Roll
Topology: SH3 type barrels.
Homology: SH3 type barrels.
Occurring in:
  1. RNA-binding protein Hfq
The deposited structure of PDB entry 3qui contains 6 copies of CATH domain 2.30.30.100 (SH3 type barrels.) in RNA-binding protein Hfq. Showing 1 copy in chain A.