› › Function and Biology

Vibrio cholerae VpsT

Source organism: Vibrio cholerae O1 biovar El Tor
Biochemical function: DNA binding
Biological process: positive regulation of DNA-templated transcription
Cellular component: protein-DNA complex

Quick links

GO terms

Sequence families

Pfam Protein families (Pfam)
PF00196
Domain description: Bacterial regulatory proteins, luxR family
Occurring in:
  1. HTH luxR-type domain-containing protein
The deposited structure of PDB entry 3kln contains 4 copies of Pfam domain PF00196 (Bacterial regulatory proteins, luxR family) in HTH luxR-type domain-containing protein. Showing 1 copy in chain A.

PF21155
Domain description: VpsT-like, receiver domain
Occurring in:
  1. HTH luxR-type domain-containing protein
The deposited structure of PDB entry 3kln contains 4 copies of Pfam domain PF21155 (VpsT-like, receiver domain) in HTH luxR-type domain-containing protein. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR000792
Domain description: Transcription regulator LuxR, C-terminal
Occurring in:
  1. HTH luxR-type domain-containing protein
IPR016032
Domain description: Signal transduction response regulator, C-terminal effector
Occurring in:
  1. HTH luxR-type domain-containing protein

Structure domains

CATH CATH domains
3.40.50.2300
Class: Alpha Beta
Architecture: 3-Layer(aba) Sandwich
Topology: Rossmann fold
Homology: Rossmann fold
Occurring in:
  1. HTH luxR-type domain-containing protein
The deposited structure of PDB entry 3kln contains 4 copies of CATH domain 3.40.50.2300 (Rossmann fold) in HTH luxR-type domain-containing protein. Showing 1 copy in chain A.
1.10.10.10
Class: Mainly Alpha
Architecture: Orthogonal Bundle
Topology: Arc Repressor Mutant, subunit A
Homology: Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain
Occurring in:
  1. HTH luxR-type domain-containing protein
The deposited structure of PDB entry 3kln contains 3 copies of CATH domain 1.10.10.10 (Arc Repressor Mutant, subunit A) in HTH luxR-type domain-containing protein. Showing 1 copy in chain A.

Quick links