› 1tcz

X-ray diffraction
1.85Å resolution

Crystal structure of a truncated version of the phage lamda protein gpD

Released:
DOI: 10.2210/pdb1tcz/pdb
PDB 1tcz coloured by chain and viewed from the front.
PDB 1tcz coloured by chain and viewed from the side.
PDB 1tcz coloured by chain and viewed from the top.
Source organism: Escherichia virus Lambda
Primary publication:
Crystal structure of a truncated version of the phage lambda protein gpD.
Chang C, Pl��ckthun A, Wlodawer A
Proteins 57 866-8 (2004)
PMID: 15317025

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Capsid decoration protein Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 95 amino acids
Theoretical weight: 9.83 KDa
Source organism: Escherichia virus Lambda
Expression system: Escherichia coli
UniProt:
  • Canonical: P03712 (Residues: 16-110; Coverage: 86%)
Gene names: D, lambdap07
Sequence domains: Bacteriophage lambda head decoration protein D
Structure domains: Head decoration protein D

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X9B
Spacegroup: P21
Unit cell:
a: 58.186Å b: 99.044Å c: 59.321Å
α: 90° β: 119° γ: 90°
R-values:
R R work R free
0.191 0.191 0.232
Expression system: Escherichia coli

Quick links

Citations

2 citation in other articles

Three-dimensional structure of tropism-switching Bordetella bacteriophage.
Dai et al. (2010)
1 more

4 mentions without citation

Virus maturation: dynamics and mechanism of a stabilizing structural transition that leads to infectivity.
Steven et al. (2005)
3 more