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Conversion of Monomeric Protein L to an Obligate Dimer by Computational Protein Design

Source organism: Finegoldia magna ATCC 29328
Biochemical function: not assigned
Biological process: not assigned
Cellular component: not assigned

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GO terms

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Sequence family

Pfam Protein family (Pfam)
PF02246
Domain description: Protein L b1 domain
Occurring in:
  1. Gram-positive cocci surface proteins LPxTG domain-containing protein
The deposited structure of PDB entry 1jml contains 1 copy of Pfam domain PF02246 (Protein L b1 domain) in Gram-positive cocci surface proteins LPxTG domain-containing protein. Showing 1 copy in chain A.

InterPro InterPro annotation
IPR003147
Domain description: Protein L, Ig light chain-binding
Occurring in:
  1. Gram-positive cocci surface proteins LPxTG domain-containing protein

Structure domain

CATH CATH domain
3.10.20.10
Class: Alpha Beta
Architecture: Roll
Topology: Ubiquitin-like (UB roll)
Homology: Ubiquitin-like (UB roll)
Occurring in:
  1. Gram-positive cocci surface proteins LPxTG domain-containing protein
The deposited structure of PDB entry 1jml contains 1 copy of CATH domain 3.10.20.10 (Ubiquitin-like (UB roll)) in Gram-positive cocci surface proteins LPxTG domain-containing protein. Showing 1 copy in chain A.
SCOP SCOP annotation
54359
Class: Alpha and beta proteins (a+b)
Fold: beta-Grasp (ubiquitin-like)
Superfamily: Immunoglobulin-binding domains
Occurring in:
  1. Gram-positive cocci surface proteins LPxTG domain-containing protein
The deposited structure of PDB entry 1jml contains 1 copy of SCOP domain 54359 (Immunoglobulin-binding domains) in Gram-positive cocci surface proteins LPxTG domain-containing protein. Showing 1 copy in chain A.

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