1bec Citations

Crystal structure of the beta chain of a T cell antigen receptor.

Science 267 1984-7 (1995)
Cited: 195 times
EuropePMC logo PMID: 7701320

Abstract

The crystal structure of the extracellular portion of the beta chain of a murine T cell antigen receptor (TCR), determined at a resolution of 1.7 angstroms, shows structural homology to immunoglobulins. The structure of the first and second hypervariable loops suggested that, in general, they adopt more restricted sets of conformations in TCR beta chains than those found in immunoglobulins; the third hypervariable loop had certain structural characteristics in common with those of immunoglobulin heavy chain variable domains. The variable and constant domains were in close contact, presumably restricting the flexibility of the beta chain. This may facilitate signal transduction from the TCR to the associated CD3 molecules in the TCR-CD3 complex.

Reviews - 1bec mentioned but not cited (1)

  1. Structural understanding of T cell receptor triggering. Xu X, Li H, Xu C. Cell Mol Immunol 17 193-202 (2020)

Articles - 1bec mentioned but not cited (12)

  1. A graph-theory algorithm for rapid protein side-chain prediction. Canutescu AA, Shelenkov AA, Dunbrack RL. Protein Sci. 12 2001-2014 (2003)
  2. Protein-protein docking benchmark version 3.0. Hwang H, Pierce B, Mintseris J, Janin J, Weng Z. Proteins 73 705-709 (2008)
  3. How evolution makes proteins fold quickly. Mirny LA, Abkevich VI, Shakhnovich EI. Proc. Natl. Acad. Sci. U.S.A. 95 4976-4981 (1998)
  4. A normalized root-mean-square distance for comparing protein three-dimensional structures. Carugo O, Pongor S. Protein Sci. 10 1470-1473 (2001)
  5. Identification of hot-spot residues in protein-protein interactions by computational docking. Grosdidier S, Fernández-Recio J. BMC Bioinformatics 9 447 (2008)
  6. Protein-protein docking using region-based 3D Zernike descriptors. Venkatraman V, Yang YD, Sael L, Kihara D. BMC Bioinformatics 10 407 (2009)
  7. Long-range cooperative binding effects in a T cell receptor variable domain. Moza B, Buonpane RA, Zhu P, Herfst CA, Rahman AK, McCormick JK, Kranz DM, Sundberg EJ. Proc. Natl. Acad. Sci. U.S.A. 103 9867-9872 (2006)
  8. Structural basis of affinity maturation and intramolecular cooperativity in a protein-protein interaction. Cho S, Swaminathan CP, Yang J, Kerzic MC, Guan R, Kieke MC, Kranz DM, Mariuzza RA, Sundberg EJ. Structure 13 1775-1787 (2005)
  9. Protein-protein binding site identification by enumerating the configurations. Guo F, Li SC, Wang L, Zhu D. BMC Bioinformatics 13 158 (2012)
  10. TCRep 3D: an automated in silico approach to study the structural properties of TCR repertoires. Leimgruber A, Ferber M, Irving M, Hussain-Kahn H, Wieckowski S, Derré L, Rufer N, Zoete V, Michielin O. PLoS ONE 6 e26301 (2011)
  11. A conserved hydrophobic patch on Vβ domains revealed by TCRβ chain crystal structures: Implications for pre-TCR dimerization. Zhou B, Chen Q, Mallis RJ, Zhang H, Zhang H, Liu JH, Reinherz EL, Wang JH. Front Immunol 2 5 (2011)
  12. T-Cell Receptor Variable β Domains Rigidify During Affinity Maturation. Fernández-Quintero ML, Seidler CA, Liedl KR. Sci Rep 10 4472 (2020)


Reviews citing this publication (57)

  1. Ligand recognition by alpha beta T cell receptors. Davis MM, Boniface JJ, Reich Z, Lyons D, Hampl J, Arden B, Chien Y. Annu. Rev. Immunol. 16 523-544 (1998)
  2. Structural basis of T cell recognition. Garcia KC, Teyton L, Wilson IA. Annu. Rev. Immunol. 17 369-397 (1999)
  3. The structure and ligand interactions of CD2: implications for T-cell function. Davis SJ, van der Merwe PA. Immunol. Today 17 177-187 (1996)
  4. The structural basis of T cell activation by superantigens. Li H, Llera A, Malchiodi EL, Mariuzza RA. Annu. Rev. Immunol. 17 435-466 (1999)
  5. Recognition by gamma/delta T cells. Chien YH, Jores R, Crowley MP. Annu. Rev. Immunol. 14 511-532 (1996)
  6. The molecular structure of cell adhesion molecules. Chothia C, Jones EY. Annu. Rev. Biochem. 66 823-862 (1997)
  7. Structural specializations of immunoglobulin superfamily members for adhesion to integrins and viruses. Wang J, Springer TA. Immunol. Rev. 163 197-215 (1998)
  8. Engineering antibody Fv fragments for cancer detection and therapy: disulfide-stabilized Fv fragments. Reiter Y, Brinkmann U, Lee B, Pastan I. Nat. Biotechnol. 14 1239-1245 (1996)
  9. What do TCR-pMHC crystal structures teach us about MHC restriction and alloreactivity? Housset D, Malissen B. Trends Immunol. 24 429-437 (2003)
  10. The (Greek) key to structures of neural adhesion molecules. Vaughn DE, Bjorkman PJ. Neuron 16 261-273 (1996)
  11. Protein folds in the all-beta and all-alpha classes. Chothia C, Hubbard T, Brenner S, Barns H, Murzin A. Annu Rev Biophys Biomol Struct 26 597-627 (1997)
  12. Mice lacking terminal deoxynucleotidyl transferase: adult mice with a fetal antigen receptor repertoire. Gilfillan S, Benoist C, Mathis D. Immunol. Rev. 148 201-219 (1995)
  13. MHC restriction in three dimensions: a view of T cell receptor/ligand interactions. Bjorkman PJ. Cell 89 167-170 (1997)
  14. The structure of the T cell antigen receptor. Bentley GA, Mariuzza RA. Annu. Rev. Immunol. 14 563-590 (1996)
  15. Biophysical studies of T-cell receptors and their ligands. Fremont DH, Rees WA, Kozono H. Curr. Opin. Immunol. 8 93-100 (1996)
  16. Functions of TCR and pre-TCR subunits: lessons from gene ablation. Malissen B, Malissen M. Curr. Opin. Immunol. 8 383-393 (1996)
  17. Exquisite specificity and peptide epitope recognition promiscuity, properties shared by antibodies from sharks to humans. Marchalonis JJ, Adelman MK, Robey IF, Schluter SF, Edmundson AB. J. Mol. Recognit. 14 110-121 (2001)
  18. Interactions of TCRs with MHC-peptide complexes: a quantitative basis for mechanistic models. Margulies DH. Curr. Opin. Immunol. 9 390-395 (1997)
  19. T-cell receptor structure and TCR complexes. Wilson IA, Garcia KC. Curr. Opin. Struct. Biol. 7 839-848 (1997)
  20. Issues concerning the nature of antigen recognition by alpha beta and gamma delta T-cell receptors. Davis MM, Chien Y. Immunol. Today 16 316-318 (1995)
  21. Structure and function of the T-cell receptor: insights from X-ray crystallography. Fields BA, Mariuzza RA. Immunol. Today 17 330-336 (1996)
  22. Structure-Based, Rational Design of T Cell Receptors. Zoete V, Irving M, Ferber M, Cuendet MA, Michielin O. Front Immunol 4 268 (2013)
  23. Early T-cell development in CD3-deficient mice. Tanaka Y, Ardouin L, Gillet A, Lin SY, Magnan A, Malissen B, Malissen M. Immunol. Rev. 148 171-199 (1995)
  24. Structure of gammadelta T cell receptors and their recognition of non-peptide antigens. Allison TJ, Garboczi DN. Mol. Immunol. 38 1051-1061 (2002)
  25. T-cell receptors in ectothermic vertebrates. Charlemagne J, Fellah JS, De Guerra A, Kerfourn F, Partula S. Immunol. Rev. 166 87-102 (1998)
  26. Comparative sequence analysis of the human T cell receptor beta chain in juvenile rheumatoid arthritis and juvenile spondylarthropathies: evidence for antigenic selection of T cells in the synovium. Thompson SD, Murray KJ, Grom AA, Passo MH, Choi E, Glass DN. Arthritis Rheum. 41 482-497 (1998)
  27. Structure-function studies of T-cell receptor-superantigen interactions. Li H, Llera A, Mariuzza RA. Immunol. Rev. 163 177-186 (1998)
  28. Implications of atomic-resolution structures for cell adhesion. Leahy DJ. Annu. Rev. Cell Dev. Biol. 13 363-393 (1997)
  29. Indirect T cell recognition in allograft rejection. Bradley JA. Int. Rev. Immunol. 13 245-255 (1996)
  30. Binding energetics of T-cell receptors: correlation with immunological consequences. Manning TC, Kranz DM. Immunol. Today 20 417-422 (1999)
  31. Molecular interactions between extracellular components of the T-cell receptor signaling complex. Garcia KC. Immunol. Rev. 172 73-85 (1999)
  32. Alloreactivity, antigen recognition and T-cell selection: three diverse T-cell recognition problems with a common solution. Joyce S, Nathenson SG. Immunol. Rev. 154 59-103 (1996)
  33. Conserved motifs in T-cell receptor CDR1 and CDR2: implications for ligand and CD8 co-receptor binding. Arden B. Curr. Opin. Immunol. 10 74-81 (1998)
  34. Glimpses at the recognition of peptide/MHC complexes by T-cell antigen receptors. Mazza G, Housset D, Piras C, Gregoire C, Lin SY, Fontecilla-Camps JC, Malissen B. Immunol. Rev. 163 187-196 (1998)
  35. Biophysical and structural studies of TCRs and ligands: implications for T cell signaling. Ward ES, Qadri A. Curr. Opin. Immunol. 9 97-106 (1997)
  36. Antibody engineering. Nilsson B. Curr. Opin. Struct. Biol. 5 450-456 (1995)
  37. T-cell receptor peptide-MHC interactions: biological lessons from structural studies. Garcia KC, Teyton L. Curr. Opin. Biotechnol. 9 338-343 (1998)
  38. The tetramer model: a new view of class II MHC molecules in antigenic presentation to T cells. Pareja E, Tobes R, Martín J, Nieto A. Tissue Antigens 50 421-428 (1997)
  39. Staphylococcal enterotoxins B and C. Structural requirements for superantigenic and entertoxigenic activities. Bohach GA. Prep. Biochem. Biotechnol. 27 79-110 (1997)
  40. Not just another Fab: the crystal structure of a TcR-MHC-peptide complex. Jardetzky T. Structure 5 159-163 (1997)
  41. Recognition at the cell surface: recent structural insights. Stuart DI, Jones EY. Curr. Opin. Struct. Biol. 5 735-743 (1995)
  42. Superantigen engineering. Abrahmsén L. Curr. Opin. Struct. Biol. 5 464-470 (1995)
  43. T cell receptor (TCR) repertoire in alloimmune responses. Finn OJ, Debruyne LA, Bishop DK. Int. Rev. Immunol. 13 187-207 (1996)
  44. The organization and structure of immunoglobulin and T-cell receptor genes in the most phylogenetically distant jawed vertebrates: evolutionary implications. Litman GW, Rast JP. Res. Immunol. 147 226-233 (1996)
  45. B-cell superantigens: molecular and cellular implications. Silverman GJ, Nayak JV, La Cava A. Int. Rev. Immunol. 14 259-290 (1997)
  46. Diversity in the human T cell receptor beta chain. LaRocque R, Robinson MA. Hum. Immunol. 48 3-11 (1996)
  47. Staphylococcal enterotoxins A, D, and E. Structure and function, including mechanism of T-cell superantigenicity. Svensson LA, Schad EM, Sundström M, Antonsson P, Kalland T, Dohlsten M. Prep. Biochem. Biotechnol. 27 111-141 (1997)
  48. The structural basis of T-cell receptor (TCR) activation: An enduring enigma. Mariuzza RA, Agnihotri P, Orban J. J Biol Chem 295 914-925 (2020)
  49. Immunopathogenesis of juvenile rheumatoid arthritis: role of T cells and MHC. Sakkas LI, Platsoucas CD. Immunol. Res. 14 218-236 (1995)
  50. The structure of the antigen-binding site of immunoglobulins and T-cell receptors. Bentley GA, Boulot G, Mariuzza RA. Res. Immunol. 146 277-290 (1995)
  51. Toward a predictive understanding of molecular recognition. Weng Z, DeLisi C. Immunol. Rev. 163 251-266 (1998)
  52. A high affinity T cell receptor? Alberti S. Immunol. Cell Biol. 74 292-297 (1996)
  53. Presentation of antigenic peptides by products of the major histocompatibility complex. Fairchild PJ. J. Pept. Sci. 4 182-194 (1998)
  54. αβ T-cell receptor bias in disease and therapy (Review). Wang CY, Yu PF, He XB, Fang YX, Cheng WY, Jing ZZ. Int. J. Oncol. 48 2247-2256 (2016)
  55. The T cell receptor (TCR) in HLA-B27-restricted T cell responses--an introduction. Märker-Hermann E, Duchmann R, May E, Ackermann B, Meyer Zum Büschenfelde KH. Clin. Rheumatol. 15 Suppl 1 86-90 (1996)
  56. CEACAM1 structure and function in immunity and its therapeutic implications. Kim WM, Huang YH, Gandhi A, Blumberg RS. Semin. Immunol. 42 101296 (2019)
  57. Recombinant T-cell receptors: an immunologic link to cancer therapy. Calogero A, de Leij LF, Mulder NH, Hospers GA. J. Immunother. 23 393-400 (2000)

Articles citing this publication (125)

  1. Structure of the complex between human T-cell receptor, viral peptide and HLA-A2. Garboczi DN, Ghosh P, Utz U, Fan QR, Biddison WE, Wiley DC. Nature 384 134-141 (1996)
  2. Two human T cell receptors bind in a similar diagonal mode to the HLA-A2/Tax peptide complex using different TCR amino acids. Ding YH, Smith KJ, Garboczi DN, Utz U, Biddison WE, Wiley DC. Immunity 8 403-411 (1998)
  3. A TCR binds to antagonist ligands with lower affinities and faster dissociation rates than to agonists. Lyons DS, Lieberman SA, Hampl J, Boniface JJ, Chien Y, Berg LJ, Davis MM. Immunity 5 53-61 (1996)
  4. Crystal structure of a T-cell receptor beta-chain complexed with a superantigen. Fields BA, Malchiodi EL, Li H, Ysern X, Stauffacher CV, Schlievert PM, Karjalainen K, Mariuzza RA. Nature 384 188-192 (1996)
  5. Structure of a human gammadelta T-cell antigen receptor. Allison TJ, Winter CC, Fournié JJ, Bonneville M, Garboczi DN. Nature 411 820-824 (2001)
  6. Alanine scanning mutagenesis of an alphabeta T cell receptor: mapping the energy of antigen recognition. Manning TC, Schlueter CJ, Brodnicki TC, Parke EA, Speir JA, Garcia KC, Teyton L, Wilson IA, Kranz DM. Immunity 8 413-425 (1998)
  7. Three-dimensional structure of the complex between a T cell receptor beta chain and the superantigen staphylococcal enterotoxin B. Li H, Llera A, Tsuchiya D, Leder L, Ysern X, Schlievert PM, Karjalainen K, Mariuzza RA. Immunity 9 807-816 (1998)
  8. Atomic structure of an alphabeta T cell receptor (TCR) heterodimer in complex with an anti-TCR fab fragment derived from a mitogenic antibody. Wang J, Lim K, Smolyar A, Teng M, Liu J, Tse AG, Liu J, Hussey RE, Chishti Y, Thomson CT, Sweet RM, Nathenson SG, Chang HC, Sacchettini JC, Reinherz EL. EMBO J. 17 10-26 (1998)
  9. The specificity and orientation of a TCR to its peptide-MHC class II ligands. Sant'Angelo DB, Waterbury G, Preston-Hurlburt P, Yoon ST, Medzhitov R, Hong SC, Janeway CA. Immunity 4 367-376 (1996)
  10. Selection of functional T cell receptor mutants from a yeast surface-display library. Kieke MC, Shusta EV, Boder ET, Teyton L, Wittrup KD, Kranz DM. Proc. Natl. Acad. Sci. U.S.A. 96 5651-5656 (1999)
  11. Evaluation of protein docking predictions using Hex 3.1 in CAPRI rounds 1 and 2. Ritchie DW. Proteins 52 98-106 (2003)
  12. Protein domain interfaces: characterization and comparison with oligomeric protein interfaces. Jones S, Marin A, Thornton JM. Protein Eng. 13 77-82 (2000)
  13. A Shannon entropy analysis of immunoglobulin and T cell receptor. Stewart JJ, Lee CY, Ibrahim S, Watts P, Shlomchik M, Weigert M, Litwin S. Mol. Immunol. 34 1067-1082 (1997)
  14. Superantigen binding to a T cell receptor beta chain of known three-dimensional structure. Malchiodi EL, Eisenstein E, Fields BA, Ohlendorf DH, Schlievert PM, Karjalainen K, Mariuzza RA. J. Exp. Med. 182 1833-1845 (1995)
  15. A mutational analysis of the binding of staphylococcal enterotoxins B and C3 to the T cell receptor beta chain and major histocompatibility complex class II. Leder L, Llera A, Lavoie PM, Lebedeva MI, Li H, Sékaly RP, Bohach GA, Gahr PJ, Schlievert PM, Karjalainen K, Mariuzza RA. J. Exp. Med. 187 823-833 (1998)
  16. Crystal structure of the HLA-Cw3 allotype-specific killer cell inhibitory receptor KIR2DL2. Snyder GA, Brooks AG, Sun PD. Proc. Natl. Acad. Sci. U.S.A. 96 3864-3869 (1999)
  17. Kinetics and thermodynamics of T cell receptor- autoantigen interactions in murine experimental autoimmune encephalomyelitis. Garcia KC, Radu CG, Ho J, Ober RJ, Ward ES. Proc. Natl. Acad. Sci. U.S.A. 98 6818-6823 (2001)
  18. Increased peptide promiscuity provides a rationale for the lack of N regions in the neonatal T cell repertoire. Gavin MA, Bevan MJ. Immunity 3 793-800 (1995)
  19. Structure of the Vdelta domain of a human gammadelta T-cell antigen receptor. Li H, Lebedeva MI, Llera AS, Fields BA, Brenner MB, Mariuzza RA. Nature 391 502-506 (1998)
  20. The three-dimensional structure of a T-cell antigen receptor V alpha V beta heterodimer reveals a novel arrangement of the V beta domain. Housset D, Mazza G, Grégoire C, Piras C, Malissen B, Fontecilla-Camps JC. EMBO J. 16 4205-4216 (1997)
  21. Analysis of the T-cell receptor repertoire of human T-cell leukemia virus type 1 (HTLV-1) Tax-specific CD8+ cytotoxic T lymphocytes from patients with HTLV-1-associated disease: evidence for oligoclonal expansion. Utz U, Banks D, Jacobson S, Biddison WE. J. Virol. 70 843-851 (1996)
  22. Evidence that the antigen receptors of cytotoxic T lymphocytes interact with a common recognition pattern on the H-2Kb molecule. Sun R, Shepherd SE, Geier SS, Thomson CT, Sheil JM, Nathenson SG. Immunity 3 573-582 (1995)
  23. One of the CD3epsilon subunits within a T cell receptor complex lies in close proximity to the Cbeta FG loop. Ghendler Y, Smolyar A, Chang HC, Reinherz EL. J. Exp. Med. 187 1529-1536 (1998)
  24. TCR Mechanobiology: Torques and Tunable Structures Linked to Early T Cell Signaling. Kim ST, Shin Y, Brazin K, Mallis RJ, Sun ZY, Wagner G, Lang MJ, Reinherz EL. Front Immunol 3 76 (2012)
  25. Different superantigens interact with distinct sites in the Vbeta domain of a single T cell receptor. Hong SC, Waterbury G, Janeway CA. J. Exp. Med. 183 1437-1446 (1996)
  26. Mitogens, superantigens, and nominal antigens elicit distinctive patterns of TCRB CDR3 diversity. Currier JR, Deulofeut H, Barron KS, Kehn PJ, Robinson MA. Hum. Immunol. 48 39-51 (1996)
  27. Dominance of the BV17 element in nickel-specific human T cell receptors relates to severity of contact sensitivity. Vollmer J, Fritz M, Dormoy A, Weltzien HU, Moulon C. Eur. J. Immunol. 27 1865-1874 (1997)
  28. Characterization of T cell receptors engineered for high affinity against toxic shock syndrome toxin-1. Buonpane RA, Moza B, Sundberg EJ, Kranz DM. J. Mol. Biol. 353 308-321 (2005)
  29. Three-dimensional structure of H-2Dd complexed with an immunodominant peptide from human immunodeficiency virus envelope glycoprotein 120. Li H, Natarajan K, Malchiodi EL, Margulies DH, Mariuzza RA. J. Mol. Biol. 283 179-191 (1998)
  30. Protein fold analysis of the B30.2-like domain. Seto MH, Liu HL, Zajchowski DA, Whitlow M. Proteins 35 235-249 (1999)
  31. Binding free energy differences in a TCR-peptide-MHC complex induced by a peptide mutation: a simulation analysis. Michielin O, Karplus M. J. Mol. Biol. 324 547-569 (2002)
  32. Canonical structures for the hypervariable regions of T cell alphabeta receptors. Al-Lazikani B, Lesk AM, Chothia C. J. Mol. Biol. 295 979-995 (2000)
  33. Role of the T cell receptor alpha chain in stabilizing TCR-superantigen-MHC class II complexes. Andersen PS, Lavoie PM, Sékaly RP, Churchill H, Kranz DM, Schlievert PM, Karjalainen K, Mariuzza RA. Immunity 10 473-483 (1999)
  34. T cell receptor repertoire diversity and clonal expansion in human neonates. Schelonka RL, Raaphorst FM, Infante D, Kraig E, Teale JM, Infante AJ. Pediatr. Res. 43 396-402 (1998)
  35. Structural basis of T-cell specificity and activation by the bacterial superantigen TSST-1. Moza B, Varma AK, Buonpane RA, Zhu P, Herfst CA, Nicholson MJ, Wilbuer AK, Seth NP, Wucherpfennig KW, McCormick JK, Kranz DM, Sundberg EJ. EMBO J. 26 1187-1197 (2007)
  36. Mycoplasma superantigen is a CDR3-dependent ligand for the T cell antigen receptor. Hodtsev AS, Choi Y, Spanopoulou E, Posnett DN. J. Exp. Med. 187 319-327 (1998)
  37. The 1.7 A crystal structure of BPI: a study of how two dissimilar amino acid sequences can adopt the same fold. Kleiger G, Beamer LJ, Grothe R, Mallick P, Eisenberg D. J. Mol. Biol. 299 1019-1034 (2000)
  38. CD4 dimerization and oligomerization: implications for T-cell function and structure-based drug design. Li S, Satoh T, Korngold R, Huang Z. Immunol. Today 19 455-462 (1998)
  39. Structural features of T cell receptor variable regions that enhance domain stability and enable expression as single-chain ValphaVbeta fragments. Richman SA, Aggen DH, Dossett ML, Donermeyer DL, Allen PM, Greenberg PD, Kranz DM. Mol. Immunol. 46 902-916 (2009)
  40. Conservation of cys-cys trp structural triads and their geometry in the protein domains of immunoglobulin superfamily members. Ioerger TR, Du C, Linthicum DS. Mol. Immunol. 36 373-386 (1999)
  41. Dual T cell receptor T cells have a decreased sensitivity to physiological ligands due to reduced density of each T cell receptor. Blichfeldt E, Munthe LA, Røtnes JS, Bogen B. Eur. J. Immunol. 26 2876-2884 (1996)
  42. Somatic hypermutation of the T cell receptor V beta gene in microdissected splenic white pulps from HIV-1-positive patients. Cheynier R, Henrichwark S, Wain-Hobson S. Eur. J. Immunol. 28 1604-1610 (1998)
  43. Topology of T cell receptor-peptide/class I MHC interaction defined by charge reversal complementation and functional analysis. Chang HC, Smolyar A, Spoerl R, Witte T, Yao Y, Goyarts EC, Nathenson SG, Reinherz EL. J. Mol. Biol. 271 278-293 (1997)
  44. Vbeta-dependent stimulation of bovine and human T cells by host-specific staphylococcal enterotoxins. Deringer JR, Ely RJ, Monday SR, Stauffacher CV, Bohach GA. Infect. Immun. 65 4048-4054 (1997)
  45. Binding properties and solubility of single-chain T cell receptors expressed in E. coli. Schodin BA, Schlueter CJ, Kranz DM. Mol. Immunol. 33 819-829 (1996)
  46. Cloning and comparative analysis of the human pre-T-cell receptor alpha-chain gene. Del Porto P, Bruno L, Mattei MG, von Boehmer H, Saint-Ruf C. Proc. Natl. Acad. Sci. U.S.A. 92 12105-12109 (1995)
  47. T-cell repertoire analysis in chronic plaque psoriasis suggests an antigen-specific immune response. Bour H, Puisieux I, Even J, Kourilsky P, Favrot M, Musette P, Nicolas JF. Hum. Immunol. 60 665-676 (1999)
  48. The TCR C beta FG loop regulates alpha beta T cell development. Touma M, Chang HC, Sasada T, Handley M, Clayton LK, Reinherz EL. J Immunol 176 6812-6823 (2006)
  49. Contributions of CD4+, CD8+, and CD4+CD8+ T cells to skewing within the peripheral T cell receptor beta chain repertoire of healthy macaques. Currier JR, Stevenson KS, Kehn PJ, Zheng K, Hirsch VM, Robinson MA. Hum. Immunol. 60 209-222 (1999)
  50. Folding, heterodimeric association and specific peptide recognition of a murine alphabeta T-cell receptor expressed in Escherichia coli. Pecorari F, Tissot AC, Plückthun A. J. Mol. Biol. 285 1831-1843 (1999)
  51. Three-dimensional structural location and molecular functional effects of missense SNPs in the T cell receptor Vbeta domain. Wang Z, Moult J. Proteins 53 748-757 (2003)
  52. Shared fine specificity between T-cell receptors and an antibody recognizing a peptide/major histocompatibility class I complex. Stryhn A, Andersen PS, Pedersen LO, Svejgaard A, Holm A, Thorpe CJ, Fugger L, Buus S, Engberg J. Proc. Natl. Acad. Sci. U.S.A. 93 10338-10342 (1996)
  53. News Imperfect interfaces. Ysern X, Li H, Mariuzza RA. Nat. Struct. Biol. 5 412-414 (1998)
  54. Display of functional alphabeta single-chain T-cell receptor molecules on the surface of bacteriophage. Weidanz JA, Card KF, Edwards A, Perlstein E, Wong HC. J. Immunol. Methods 221 59-76 (1998)
  55. Influence of the NH2-terminal amino acid of the T cell receptor alpha chain on major histocompatibility complex (MHC) class II + peptide recognition. Seibel JL, Wilson N, Kozono H, Marrack P, Kappler JW. J. Exp. Med. 185 1919-1927 (1997)
  56. Modeling of the TCR-MHC-peptide complex. Michielin O, Luescher I, Karplus M. J. Mol. Biol. 300 1205-1235 (2000)
  57. Pre-TCR ligand binding impacts thymocyte development before αβTCR expression. Mallis RJ, Bai K, Arthanari H, Hussey RE, Handley M, Li Z, Chingozha L, Duke-Cohan JS, Lu H, Wang JH, Zhu C, Wagner G, Reinherz EL. Proc. Natl. Acad. Sci. U.S.A. 112 8373-8378 (2015)
  58. The J beta segment of the T cell receptor contributes to the V beta-specific T cell expansion caused by staphylococcal enterotoxin B and Urtica dioica superantigens. Musette P, Galelli A, Truffa-Bachi P, Peumans W, Kourilsky P, Gachelin G. Eur. J. Immunol. 26 618-622 (1996)
  59. An endoplasmic reticulum retention function for the cytoplasmic tail of the human pre-T cell receptor (TCR) alpha chain: potential role in the regulation of cell surface pre-TCR expression levels. Carrasco YR, Ramiro AR, Trigueros C, de Yébenes VG, García-Peydró M, Toribio ML. J. Exp. Med. 193 1045-1058 (2001)
  60. Covalent assembly of a soluble T cell receptor-peptide-major histocompatibility class I complex. Grégoire C, Lin SY, Mazza G, Rebai N, Luescher IF, Malissen B. Proc. Natl. Acad. Sci. U.S.A. 93 7184-7189 (1996)
  61. Dual conformations of a T cell receptor V alpha homodimer: implications for variability in V alpha V beta domain association. Li H, Lebedeva MI, Ward ES, Mariuzza RA. J. Mol. Biol. 269 385-394 (1997)
  62. Vbeta4(+) T cells promote clearance of infection in murine pulmonary histoplasmosis. Gomez FJ, Cain JA, Gibbons R, Allendoerfer R, Deepe GS. J. Clin. Invest. 102 984-995 (1998)
  63. Guided docking: first step to locate potential binding sites. Fitzjohn PW, Bates PA. Proteins 52 28-32 (2003)
  64. Heterodimeric CD3epsilongamma extracellular domain fragments: production, purification and structural analysis. Kim KS, Sun ZY, Wagner G, Reinherz EL. J. Mol. Biol. 302 899-916 (2000)
  65. Point mutations in the beta chain CDR3 can alter the T cell receptor recognition pattern on an MHC class I/peptide complex over a broad interface area. Goyarts EC, Vegh Z, Kalergis AM, Hörig H, Papadopoulos NJ, Young AC, Thomson CT, Chang HC, Joyce S, Nathenson SG. Mol. Immunol. 35 593-607 (1998)
  66. Rejection of cardiac allografts by T cells expressing a restricted repertoire of T-cell receptor V beta genes. Shirwan H, Barwari L, Cramer DV. Immunology 90 572-578 (1997)
  67. A T cell receptor V alpha domain expressed in bacteria: does it dimerize in solution? Plaksin D, Chacko S, McPhie P, Bax A, Padlan EA, Margulies DH. J. Exp. Med. 184 1251-1258 (1996)
  68. Cloning, expression and interaction of human T-cell receptors with the bacterial superantigen SSA. De Marzí MC, Fernández MM, Sundberg EJ, Molinero L, Zwirner NW, Llera AS, Mariuzza RA, Malchiodi EL. Eur. J. Biochem. 271 4075-4083 (2004)
  69. V beta CDR3 motifs associated with BP recognition are enriched in OX-40+ spinal cord T cells of Lewis rats with EAE. Buenafe AC, Weinberg AD, Culbertson NE, Vandenbark AA, Offner H. J. Neurosci. Res. 44 562-567 (1996)
  70. Comparative sequence analysis of the human T cell receptor TCRA and TCRB CDR3 regions. Moss PA, Bell JI. Hum. Immunol. 48 32-38 (1996)
  71. Modeling the interactions of a peptide-major histocompatibility class I ligand with its receptors. I. Recognition by two alpha beta T cell receptors. Rognan D, Stryhn A, Fugger L, Lyngbaek S, Engberg J, Andersen PS, Buus S. J. Comput. Aided Mol. Des. 14 53-69 (2000)
  72. Redirecting the complete T cell receptor/CD3 signaling machinery towards native antigen via modified T cell receptor. Brocker T, Riedinger M, Karjalainen K. Eur. J. Immunol. 26 1770-1774 (1996)
  73. Structural analysis of TCRalpha and beta chains from human T-Cell clones specific for small nuclear ribonucleoprotein polypeptides Sm-D, Sm-B and U1-70 kDa: TCR complementarity determining region 3 usage appears highly conserved. Talken BL, Bailey CW, Reardon SL, Caldwell CW, Hoffman RW. Scand. J. Immunol. 54 204-210 (2001)
  74. Use of T cell receptor/HLA-DRB1*04 molecular modeling to predict site-specific interactions for the DR shared epitope associated with rheumatoid arthritis. Penzotti JE, Nepom GT, Lybrand TP. Arthritis Rheum. 40 1316-1326 (1997)
  75. Conserved T-cell receptor beta chain CDR3 sequences in IgA nephropathy biopsies. Wu H, Zhang GY, Clarkson AR, Knight JF. Kidney Int. 55 109-119 (1999)
  76. Crystal structure of a T cell receptor Valpha11 (AV11S5) domain: new canonical forms for the first and second complementarity determining regions. Machius M, Cianga P, Deisenhofer J, Ward ES. J. Mol. Biol. 310 689-698 (2001)
  77. Characterization of T cell receptor single-chain Fv fragments secreted by myeloma cells. Grégoire C, Malissen B, Mazza G. Eur. J. Immunol. 26 2410-2416 (1996)
  78. Human major histocompatibility molecules have the intrinsic ability to form homotypic associations. Triantafilou K, Triantafilou M, Wilson KM, Fernandez N. Hum. Immunol. 61 585-598 (2000)
  79. Positioning of autoimmune TCR-Ob.2F3 and TCR-Ob.3D1 on the MBP85-99/HLA-DR2 complex. Kato Z, Stern JN, Nakamura HK, Kuwata K, Kondo N, Strominger JL. Proc. Natl. Acad. Sci. U.S.A. 105 15523-15528 (2008)
  80. Structural mutations in the constant region of the T-cell antigen receptor (TCR)beta chain and their effect on TCR alpha and beta chain interaction. Li ZG, Wu WP, Manolios N. Immunology 88 524-530 (1996)
  81. TCR binding differs for a bacterial superantigen (SEE) and a viral superantigen (Mtv-9). Liao L, Marinescu A, Molano A, Ciurli C, Sekaly RP, Fraser JD, Popowicz A, Posnett DN. J. Exp. Med. 184 1471-1482 (1996)
  82. Flexibility in T-cell receptor ligand repertoires depends on MHC and T-cell receptor clonotype. Geluk A, van Meijgaarden KE, Ottenhoff TH. Immunology 90 370-375 (1997)
  83. Impaired NK1.1 T cell development in mice transgenic for a T cell receptor beta chain lacking the large, solvent-exposed cbeta FG loop. Degermann S, Sollami G, Karjalainen K. J. Exp. Med. 190 1357-1362 (1999)
  84. T cell receptor beta chain lacking the large solvent-exposed Cbeta FG loop supports normal alpha/beta T cell development and function in transgenic mice. Degermann S, Sollami G, Karjalainen K. J. Exp. Med. 189 1679-1684 (1999)
  85. The X-ray crystal structure of a Valpha2.6Jalpha38 mouse T cell receptor domain at 2.5 A resolution: alternate modes of dimerization and crystal packing. Plaksin D, Chacko S, Navaza J, Margulies DH, Padlan EA. J. Mol. Biol. 289 1153-1161 (1999)
  86. Efficient preservation in a silicon oxide matrix of Escherichia coli, producer of recombinant proteins. Desimone MF, De Marzi MC, Copello GJ, Fernández MM, Malchiodi EL, Diaz LE. Appl. Microbiol. Biotechnol. 68 747-752 (2005)
  87. Molecular modeling of a T-cell receptor bound to a major histocompatibility complex molecule: implications for T-cell recognition. Almagro JC, Vargas-Madrazo E, Lara-Ochoa F, Horjales E. Protein Sci. 4 1708-1717 (1995)
  88. Restricted T cell receptor repertoire for acetylcholine receptor in murine myasthenia gravis. Kraig E, Pierce JL, Clarkin KZ, Standifer NE, Currier P, Wall KA, Infante AJ. J. Neuroimmunol. 71 87-95 (1996)
  89. Soluble HIV-specific T cell receptor: expression, purification and analysis of the specificity. Anikeeva N, Lebedeva T, Sumaroka M, Kalams SA, Sykulev Y. J. Immunol. Methods 277 75-86 (2003)
  90. T cells receptor beta-chain repertoires are nonrandomly selected in responses to HLA-DR1. Hand SL, Alter MD, Finn OJ. Transplantation 61 1084-1094 (1996)
  91. Evolution and selection of primate T cell antigen receptor BV8 gene subfamily. Funkhouser W, Koop BF, Charmley P, Martindale D, Slightom J, Hood L. Mol. Phylogenet. Evol. 8 51-64 (1997)
  92. Molecular requirements for T cell recognition by a major histocompatibility complex class II-restricted T cell receptor: the involvement of the fourth hypervariable loop of the Valpha domain. Thatte J, Qadri A, Radu C, Ward ES. J. Exp. Med. 189 509-520 (1999)
  93. Comment Pictures of MHC restriction. Parham P. Nature 384 109-110 (1996)
  94. V alpha domain modulates the multiple topologies of mouse T cell receptor V beta20/staphylococcal enterotoxins A and E complexes. Bravo de Alba Y, Marche PN, Cazenave PA, Cloutier I, Sekaly RP, Thibodeau J. Eur. J. Immunol. 27 92-99 (1997)
  95. A relation between the principal axes of inertia and ligand binding. Foote J, Raman A. Proc. Natl. Acad. Sci. U.S.A. 97 978-983 (2000)
  96. Alloreactive anti-HLA-B7 cytolytic T cell clones use restricted T cell receptor genes. Li YY, Smith KD, Shi Y, Lutz CT. Transplantation 62 954-961 (1996)
  97. Direct assessment of junctional diversity in rearranged T cell receptor beta chain encoding genes by combined heteroduplex and single strand conformation polymorphism (SSCP) analysis. Offermans MT, Struyk L, de Geus B, Breedveld FC, van den Elsen PJ, Rozing J. J. Immunol. Methods 191 21-31 (1996)
  98. Major histocompatibility complex recognition by immune receptors: differences among T cell receptor versus antibody interactions with the VSV8/H-2Kb complex. Witte T, Smolyar A, Spoerl R, Goyarts EC, Nathenson SG, Reinherz EL, Chang HC. Eur. J. Immunol. 27 227-233 (1997)
  99. Structure of Staphylococcal Enterotoxin E in Complex with TCR Defines the Role of TCR Loop Positioning in Superantigen Recognition. Rödström KE, Regenthal P, Lindkvist-Petersson K. PLoS ONE 10 e0131988 (2015)
  100. Crystal structure of an isolated V(alpha) domain of the 2C T-cell receptor. Rudolph MG, Huang M, Teyton L, Wilson IA. J. Mol. Biol. 314 1-8 (2001)
  101. Crystal structures of T cell receptor (beta) chains related to rheumatoid arthritis. Li H, Van Vranken S, Zhao Y, Li Z, Guo Y, Eisele L, Li Y. Protein Sci. 14 3025-3038 (2005)
  102. NMR: an essential structural tool for integrative studies of T cell development, pMHC ligand recognition and TCR mechanobiology. Mallis RJ, Brazin KN, Duke-Cohan JS, Hwang W, Wang JH, Wagner G, Arthanari H, Lang MJ, Reinherz EL. J Biomol NMR 73 319-332 (2019)
  103. Structural features of the interaction between an anti-clonotypic antibody and its cognate T-cell antigen receptor. Mazza G, Housset D, Piras C, Grégoire C, Fontecilla-Camps JC, Malissen B. J. Mol. Biol. 287 773-780 (1999)
  104. Analysis of the CDR3 region of alpha/beta T-cell receptors (TCRs) and TCR BD gene double-stranded recombination signal sequence breaks end in peripheral blood mononuclear cells of T-lineage acute lymphoblastic leukemia. Xin-Sheng Y, Zheng-Jun X, Li M, Wan-Bang S, Wei-Yang Z, Qian W, Zhi-Ming H, Min-Jie M, Ying L, Zhen-Qiang W, Xiao-Wei H, Ju-Fang W, Xiao-Ning W. Clin Lab Haematol 28 405-415 (2006)
  105. Cloning, expression, and crystallization of the V delta domain of a human gamma delta T-cell receptor. Lebedeva MI, Fields BA, Spits H, Panchamoorthy G, Brenner MB, Mariuzza RA. Protein Sci. 5 2638-2642 (1996)
  106. Conserved transmembrane tyrosine residues of the TCR beta chain are required for TCR expression and function in primary T cells and hybridomas. Kunjibettu S, Fuller-Espie S, Carey GB, Spain LM. Int. Immunol. 13 211-222 (2001)
  107. H-2Ld-alloreactive T cell hybridomas utilize diverse V alpha and V beta T cell receptor chains. Louie KA, Ochoa-Garay J, Chen PJ, McKinney D, Groshen S, McMillan M. Mol. Immunol. 33 747-758 (1996)
  108. T cell lines specific for a synthetic Heymann nephritis peptide derived from the receptor-associated protein. Wu H, Zhang GY, Knight JF. Clin. Exp. Immunol. 121 157-164 (2000)
  109. T-cell receptors: feeling out the complex. Padlan EA, Marguilies DH. Curr. Biol. 7 R17-20 (1997)
  110. The human T cell receptor repertoire utilized in response to HBsAg. Deulofeut H, Robinson MA. Hum. Immunol. 57 54-61 (1997)
  111. The interchain disulfide linkage of T-cell antigen receptor-alpha and -beta chains is a prerequisite for T-cell activation. Li Z, Wu W, Kemp O, Stephen M, Manolios N. Cell. Immunol. 190 101-111 (1998)
  112. Xenogeneic beta 2-microglobulin substitution affects functional binding of MHC class I molecules by CD8+ T cells. Benoit LA, Tan R. J Immunol 179 3588-3595 (2007)
  113. Differential reactivity of TCR Vbeta10 alleles to a mouse mammary tumor virus superantigen. Maillard I, Xenarios I, Diggelmann H, Orbea HA. Eur. J. Immunol. 28 3075-3085 (1998)
  114. Identification of a novel pre-TCR isoform in which the accessibility of the TCR beta subunit is determined by occupancy of the 'missing' V domain of pre-T alpha. Berger MA, Carleton M, Rhodes M, Sauder JM, Trop S, Dunbrack RL, Hugo P, Wiest DL. Int. Immunol. 12 1579-1591 (2000)
  115. Structural motifs in rheumatoid T-cell receptors. Keiber-Emmons T, Fang Q, Cai W, Friedman SM, Crow MK, Lotke P, Williams WV. DNA Cell Biol. 17 133-149 (1998)
  116. Letter Two classes of MHC class II interactions with the TCR. Tobes R, Pareja E, Nieto A, Martín J. Immunol. Today 19 192-193 (1998)
  117. Characterization of the interaction of a TCR alpha chain variable domain with MHC II I-A molecules. Qadri A, Thatte J, Radu CG, Ober B, Ward ES. Int. Immunol. 11 967-977 (1999)
  118. Peptide-MHC (pMHC) binding to a human antiviral T cell receptor induces long-range allosteric communication between pMHC- and CD3-binding sites. Rangarajan S, He Y, Chen Y, Kerzic MC, Ma B, Gowthaman R, Pierce BG, Nussinov R, Mariuzza RA, Orban J. J. Biol. Chem. 293 15991-16005 (2018)
  119. The Dynamics of the Human Leukocyte Antigen Head Domain Modulates Its Recognition by the T-Cell Receptor. García-Guerrero E, Pérez-Simón JA, Sánchez-Abarca LI, Díaz-Moreno I, De la Rosa MA, Díaz-Quintana A. PLoS ONE 11 e0154219 (2016)
  120. Conserved T-cell receptor class II major histocompatibility complex contact detected in a T-lymphocyte population. Feng M, Chou D, Liaw Y, Lai M. Immunology 95 185-192 (1998)
  121. Enterovirus 71 Infection Shapes Host T Cell Receptor Repertoire and Presumably Expands VP1-Specific TCRβ CDR3 Cluster. Liao YW, Ho BC, Chen MH, Yu SL. Pathogens 9 (2020)
  122. Frequency analysis of amino acids in the recognition regions of T-cell receptors. Lara-Ochoa F, Almagro JC, Vargas-Madrazo E, Mendez I. BioSystems 39 77-85 (1996)
  123. Generation and reactivation of T-cell receptor A joining region pseudogenes in primates. Thiel C, Otting N, Bontrop RE, Lanchbury JS. Immunogenetics 43 57-62 (1996)
  124. Identification of expanded T-cell clones by spectratyping in nonfunctioning kidney transplants. Cappuccilli M, Donati G, Comai G, Baraldi O, Conte D, Capelli I, Aiello V, Pession A, La Manna G. J Inflamm Res 10 41-47 (2017)
  125. Comment Immunology: Egocentric pre-T-cell receptors. Malissen B, Luche H. Nature 467 793-794 (2010)


Related citations provided by authors (1)

  1. Crystallisation and Preliminary X-Ray Diffraction Analysis of the Beta Chain of a T-Cell Antigen Receptor. Boulot G, Bentley GA, Karjalainen K, Mariuzza RA J. Mol. Biol. 235 795- (1994)