› 1yup

X-ray diffraction
2.1Å resolution

Reindeer beta-lactoglobulin

Released:
DOI: 10.2210/pdb1yup/pdb
PDB entry 1yup coloured by chain, front view.
PDB entry 1yup coloured by chain, side view.
PDB entry 1yup coloured by chain, top view.
Source organism: Rangifer tarandus
Primary publication:
Reindeer beta-lactoglobulin crystal structure with pseudo-body-centred noncrystallographic symmetry.
Oksanen E, Jaakola VP, Tolonen T, Valkonen K, Akerström B, Kalkkinen N, Virtanen V, Goldman A
Acta Crystallogr D Biol Crystallogr 62 1369-74 (2006)
PMID: 17057340

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-169507 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Lipocalin/cytosolic fatty-acid binding domain-containing protein Chains: A, B, C, D, E, F, G, H
Molecule details ›
Chains: A, B, C, D, E, F, G, H
Length: 162 amino acids
Theoretical weight: 18.3 KDa
Source organism: Rangifer tarandus
UniProt:
  • Canonical: Q00P86 (Residues: 19-180; Coverage: 100%)
Sequence domains: Lipocalin / cytosolic fatty-acid binding protein family
Structure domains: Lipocalin

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID29
Spacegroup: P1
Unit cell:
a: 52.24Å b: 94.14Å c: 64.15Å
α: 90° β: 105.76° γ: 90°
R-values:
R R work R free
0.239 0.235 0.311

Quick links

Citations

2 review citations

Large crystal growth by thermal control allows combined X-ray and neutron crystallographic studies to elucidate the protonation states in Aspergillus flavus urate oxidase.
Oksanen et al. (2009)
1 more

2 mentions without citation

Galline Ex-FABP is an antibacterial siderocalin and a lysophosphatidic acid sensor functioning through dual ligand specificities.
Correnti et al. (2011)
1 more