› 7bvm

X-ray diffraction
2Å resolution

Crystal structure of lysozyme delivered in wheat starch

Released:
DOI: 10.2210/pdb7bvm/pdb
PDB entry 7bvm coloured by chain, front view.
PDB entry 7bvm coloured by chain, side view.
PDB entry 7bvm coloured by chain, top view.
Source organism: Gallus gallus
Primary publication:
Polysaccharide-Based Injection Matrix for Serial Crystallography.
Nam KH
OpenAccess logo Int J Mol Sci 21 (2020)
PMID: 32397185

Function and Biology Details

Reaction catalysed: 
Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins
Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-132831 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Lysozyme C Chain: A
Molecule details ›
Chain: A
Length: 147 amino acids
Theoretical weight: 16.26 KDa
Source organism: Gallus gallus
UniProt:
  • Canonical: P00698 (Residues: 1-147; Coverage: 100%)
Gene name: LYZ
Sequence domains: C-type lysozyme/alpha-lactalbumin family

Ligands and Environments

1 bound ligand:
Ligand CL 2 x CL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PAL/PLS BEAMLINE 11C
Spacegroup: P43212
Unit cell:
a: 79.36Å b: 79.36Å c: 38.63Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.189 0.184 0.233

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Citations

1 citations in other articles

Room-Temperature Structure of Xylitol-Bound Glucose Isomerase by Serial Crystallography: Xylitol Binding in the M1 Site Induces Release of Metal Bound in the M2 Site.
Nam KH. (2021)

4 mentions without citation

Polyimide mesh-based sample holder with irregular crystal mounting holes for fixed-target serial crystallography.
Nam et al. (2021)
3 more