› 6aa7

X-ray diffraction
1.8Å resolution

Fluorescent protein from Acropora digitifera

Released:
DOI: 10.2210/pdb6aa7/pdb
PDB entry 6aa7 coloured by chain, front view.
PDB entry 6aa7 coloured by chain, side view.
PDB entry 6aa7 coloured by chain, top view.
Source organism: Acropora digitifera
Primary publication:
Spectral and structural analysis of a red fluorescent protein from Acropora digitifera.
Kim SE, Hwang KY, Nam KH
Protein Sci 28 375-381 (2019)
PMID: 30368951

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-103737 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Fluorescent protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 233 amino acids
Theoretical weight: 26.42 KDa
Source organism: Acropora digitifera
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A0A1S7IWI8 (Residues: 1-231; Coverage: 100%)
Gene names: LWE, M
Sequence domains: Green fluorescent protein
Structure domains: Green fluorescent protein

Ligands and Environments

No bound ligands
1 modified residue:
Ligand XYG 2 x XYG

Experiments and Validation Details

Entry percentile scores
X-ray source: PAL/PLS BEAMLINE 11C
Spacegroup: P21212
Unit cell:
a: 78.618Å b: 90.553Å c: 73.429Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.178 0.177 0.208
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

3 citation in other articles

Metal-Induced Fluorescence Quenching of Photoconvertible Fluorescent Protein DendFP.
Kim et al. (2022)
2 more

1 mention without citation

Spectral and structural analysis of a red fluorescent protein from Acropora digitifera.
Kim et al. (2019)