Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : ZKA    

Bonds between two atoms of the molecule

Total Number of Bonds: 110


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C53 C52 C C sing 1.53 N N
2 C53 C51 C C sing 1.53 N N
3 C52 C51 C C sing 1.53 N N
4 C54 C51 C C sing 1.55 N N
5 C51 C17 C C sing 1.55 N N
6 C17 O15 C O sing 1.42 N N
7 O15 C14 O C sing 1.42 N N
8 C14 N13 C N sing 1.48 N N
9 C14 O16 C O doub 1.19 N N
10 N13 C11 N C sing 1.45 N N
11 C33 C26 C C sing 1.54 N N
12 O12 C10 O C doub 1.19 N N
13 C11 C18 C C sing 1.53 N N
14 C11 C10 C C sing 1.53 N N
15 C49 C44 C C sing 1.53 N N
16 C49 C09 C C sing 1.54 N N
17 C18 C19 C C sing 1.56 N N
18 C10 N05 C N sing 1.47 N N
19 C44 C45 C C sing 1.55 N N
20 C44 C09 C C sing 1.53 N N
21 C45 C46 C C doub 1.35 Z N
22 C26 N25 C N doub 1.46 N Y
23 C26 C21 C C sing 1.55 N Y
24 C46 C47 C C sing 1.56 N N
25 N25 C24 N C sing 1.48 N Y
26 C47 C48 C C sing 1.56 N N
27 C09 N08 C N sing 1.49 N N
28 C09 C34 C C sing 1.55 N N
29 N08 C06 N C sing 1.49 N N
30 N05 C01 N C sing 1.58 N N
31 N05 C04 N C sing 1.33 N N
32 C19 C50 C C sing 1.56 N N
33 C50 C48 C C sing 1.56 N N
34 O20 C21 O C sing 1.41 N N
35 O20 C03 O C sing 1.44 N N
36 C21 N22 C N doub 1.45 N Y
37 C06 C01 C C sing 1.41 N N
38 C06 O07 C O doub 1.19 N N
39 C01 C02 C C sing 1.59 N N
40 C24 C30 C C doub 1.56 N Y
41 C24 C23 C C sing 1.51 N Y
42 C30 C29 C C sing 1.54 N Y
43 C04 C03 C C sing 1.64 N N
44 C34 O36 C O doub 1.19 N N
45 C34 N35 C N sing 1.46 N N
46 C03 C02 C C sing 1.3 N N
47 N22 C23 N C sing 1.47 N Y
48 C23 C27 C C doub 1.55 N Y
49 C29 C28 C C doub 1.54 N Y
50 N35 S37 N S sing 1.72 N N
51 C27 C28 C C sing 1.53 N Y
52 C28 O31 C O sing 1.41 N N
53 O39 S37 O S doub 1.47 N N
54 S37 O38 S O doub 1.47 N N
55 S37 C40 S C sing 1.83 N N
56 O31 C32 O C sing 1.42 N N
57 C40 C41 C C sing 1.53 N N
58 C40 C43 C C sing 1.54 N N
59 C40 C42 C C sing 1.53 N N
60 C41 C42 C C sing 1.53 N N
61 C17 H172 C H sing 1.1 N N
62 C17 H171 C H sing 1.1 N N
63 C01 H011 C H sing 1.1 N N
64 C02 H021 C H sing 1.1 N N
65 C02 H022 C H sing 1.1 N N
66 C03 H031 C H sing 1.1 N N
67 C04 H041 C H sing 1.1 N N
68 C04 H042 C H sing 1.1 N N
69 C11 H111 C H sing 1.1 N N
70 C18 H182 C H sing 1.1 N N
71 C18 H181 C H sing 1.1 N N
72 C19 H192 C H sing 1.1 N N
73 C19 H191 C H sing 1.1 N N
74 C27 H271 C H sing 1.08 N N
75 C29 H291 C H sing 1.08 N N
76 C30 H301 C H sing 1.08 N N
77 C32 H321 C H sing 1.1 N N
78 C32 H322 C H sing 1.1 N N
79 C32 H323 C H sing 1.1 N N
80 C33 H332 C H sing 1.1 N N
81 C33 H331 C H sing 1.1 N N
82 C33 H333 C H sing 1.1 N N
83 C41 H412 C H sing 1.1 N N
84 C41 H411 C H sing 1.1 N N
85 C42 H421 C H sing 1.1 N N
86 C42 H422 C H sing 1.1 N N
87 C43 H431 C H sing 1.1 N N
88 C43 H433 C H sing 1.1 N N
89 C43 H432 C H sing 1.1 N N
90 C44 H441 C H sing 1.1 N N
91 C45 H451 C H sing 1.08 N N
92 C46 H461 C H sing 1.08 N N
93 C47 H471 C H sing 1.1 N N
94 C47 H472 C H sing 1.1 N N
95 C48 H481 C H sing 1.1 N N
96 C48 H482 C H sing 1.1 N N
97 C49 H491 C H sing 1.1 N N
98 C49 H492 C H sing 1.1 N N
99 C50 H502 C H sing 1.1 N N
100 C50 H501 C H sing 1.1 N N
101 C52 H522 C H sing 1.1 N N
102 C52 H521 C H sing 1.1 N N
103 C53 H532 C H sing 1.1 N N
104 C53 H531 C H sing 1.1 N N
105 C54 H541 C H sing 1.1 N N
106 C54 H543 C H sing 1.1 N N
107 C54 H542 C H sing 1.1 N N
108 N08 H081 N H sing 1.0 N N
109 N13 H131 N H sing 1.0 N N
110 N35 H351 N H sing 1.0 N N