Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : XRB    

Bonds between two atoms of the molecule

Total Number of Bonds: 68


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N1 C13 N C doub 1.32 N Y
2 N1 C14 N C sing 1.32 N Y
3 C26 C25 C C doub 1.38 N Y
4 C26 C15 C C sing 1.39 N Y
5 N2 C14 N C sing 1.39 N N
6 N2 C15 N C sing 1.4 N N
7 C13 C12 C C sing 1.38 N Y
8 C25 C19 C C sing 1.39 N Y
9 C14 N6 C N doub 1.32 N Y
10 C15 C16 C C doub 1.38 N Y
11 C12 C11 C C doub 1.39 N Y
12 C19 N4 C N sing 1.39 N N
13 C19 C17 C C doub 1.4 N Y
14 N6 C11 N C sing 1.33 N Y
15 C16 C17 C C sing 1.4 N Y
16 C20 N4 C N sing 1.47 N N
17 C20 C21 C C sing 1.53 N N
18 C24 N4 C N sing 1.47 N N
19 C24 C23 C C sing 1.53 N N
20 C11 O C O sing 1.36 N N
21 C23 N5 C N sing 1.47 N N
22 C17 C18 C C sing 1.43 N N
23 C21 N5 C N sing 1.47 N N
24 O2 S O S doub 1.42 N N
25 N5 S N S sing 1.66 N N
26 O C10 O C sing 1.36 N N
27 C18 N3 C N trip 1.14 N N
28 C C1 C C sing 1.51 N N
29 S O1 S O doub 1.42 N N
30 S C22 S C sing 1.81 N N
31 C10 C1 C C doub 1.39 N Y
32 C10 C8 C C sing 1.39 N Y
33 C1 C2 C C sing 1.38 N Y
34 C9 C8 C C sing 1.51 N N
35 C8 C7 C C doub 1.38 N Y
36 C2 C3 C C doub 1.4 N Y
37 C7 C3 C C sing 1.4 N Y
38 C3 C4 C C sing 1.47 N N
39 C4 C5 C C doub 1.35 E N
40 C5 C6 C C sing 1.43 N N
41 C6 N C N trip 1.14 N N
42 C H1 C H sing 1.09 N N
43 C H2 C H sing 1.09 N N
44 C H3 C H sing 1.09 N N
45 C12 H4 C H sing 1.08 N N
46 C13 H5 C H sing 1.08 N N
47 C16 H6 C H sing 1.08 N N
48 C2 H7 C H sing 1.08 N N
49 C20 H8 C H sing 1.09 N N
50 C20 H9 C H sing 1.09 N N
51 C21 H10 C H sing 1.09 N N
52 C21 H11 C H sing 1.09 N N
53 C22 H12 C H sing 1.09 N N
54 C22 H13 C H sing 1.09 N N
55 C22 H14 C H sing 1.09 N N
56 C23 H15 C H sing 1.09 N N
57 C23 H16 C H sing 1.09 N N
58 C24 H17 C H sing 1.09 N N
59 C24 H18 C H sing 1.09 N N
60 C25 H19 C H sing 1.08 N N
61 C26 H20 C H sing 1.08 N N
62 C4 H21 C H sing 1.08 N N
63 C5 H22 C H sing 1.08 N N
64 C7 H23 C H sing 1.08 N N
65 C9 H24 C H sing 1.09 N N
66 C9 H25 C H sing 1.09 N N
67 C9 H26 C H sing 1.09 N N
68 N2 H27 N H sing 0.97 N N