Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : X8Z    

Bonds between two atoms of the molecule

Total Number of Bonds: 29


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O1 C4 O C doub 1.21 N N
2 C4 C2 C C sing 1.51 N N
3 C4 N C N sing 1.35 N N
4 C2 C1 C C sing 1.53 N N
5 C2 C3 C C sing 1.53 N N
6 C1 S C S sing 1.81 N N
7 N C8 N C sing 1.47 N N
8 N C5 N C sing 1.47 N N
9 C8 C9 C C sing 1.51 N N
10 C8 C7 C C sing 1.54 N N
11 C9 O3 C O doub 1.21 N N
12 C9 O2 C O sing 1.34 N N
13 C5 C6 C C sing 1.55 N N
14 C6 C7 C C sing 1.55 N N
15 C2 H2 C H sing 1.09 N N
16 C1 H11C C H sing 1.09 N N
17 C1 H12C C H sing 1.09 N N
18 C3 H31C C H sing 1.09 N N
19 C3 H32C C H sing 1.09 N N
20 C3 H33C C H sing 1.09 N N
21 S H S H sing 1.34 N N
22 C8 H8 C H sing 1.09 N N
23 C5 H51C C H sing 1.09 N N
24 C5 H52C C H sing 1.09 N N
25 C7 H71C C H sing 1.09 N N
26 C7 H72C C H sing 1.09 N N
27 O2 HA O H sing 0.97 N N
28 C6 H61C C H sing 1.09 N N
29 C6 H62C C H sing 1.09 N N