Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : VXR    

Bonds between two atoms of the molecule

Total Number of Bonds: 46


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C doub 1.38 N Y
2 C1 O5 C O sing 1.36 N Y
3 C1 C6 C C sing 1.47 N N
4 C2 C3 C C sing 1.42 N Y
5 C2 H2 C H sing 1.08 N N
6 C3 C4 C C doub 1.36 N Y
7 C3 H3 C H sing 1.08 N N
8 C4 C8 C C sing 1.44 N N
9 C4 O5 C O sing 1.35 N Y
10 C6 C7 C C sing 1.53 N N
11 C6 H61 C H sing 1.11 N N
12 C6 H62 C H sing 1.11 N N
13 C7 H71 C H sing 1.1 N N
14 C7 H72 C H sing 1.09 N N
15 C7 H73 C H sing 1.1 N N
16 C8 C9 C C doub 1.33 Z N
17 C8 H8 C H sing 1.09 N N
18 C9 S10 C S sing 1.71 N N
19 C9 C13 C C sing 1.49 N N
20 S10 C11 S C sing 1.76 N N
21 C11 N14 C N sing 1.31 N N
22 C11 N12 C N doub 1.3 N N
23 N12 C13 N C sing 1.38 N N
24 C13 O28 C O doub 1.22 N N
25 N14 C15 N C sing 1.47 N N
26 N14 HN14 N H sing 1.01 N N
27 C15 C17 C C sing 1.52 N N
28 C15 C16 C C sing 1.49 N N
29 C15 H15 C H sing 1.11 N N
30 C16 C26 C C doub 1.4 N Y
31 C16 C22 C C sing 1.39 N Y
32 C17 N21 C N doub 1.28 N Y
33 C17 N18 C N sing 1.33 N Y
34 N18 N19 N N sing 1.34 N Y
35 N18 HN18 N H sing 1.01 N N
36 N19 N20 N N doub 1.33 N Y
37 N20 N21 N N sing 1.38 N Y
38 C22 C23 C C doub 1.39 N Y
39 C22 H22 C H sing 1.09 N N
40 C23 C24 C C sing 1.4 N Y
41 C23 H23 C H sing 1.09 N N
42 C24 C25 C C doub 1.4 N Y
43 C24 F C F sing 1.34 N N
44 C25 C26 C C sing 1.4 N Y
45 C25 H25 C H sing 1.09 N N
46 C26 H26 C H sing 1.09 N N