Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : UFT    

Bonds between two atoms of the molecule

Total Number of Bonds: 34


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 OP3 P O P sing 1.61 N N
2 OP1 P O P doub 1.48 N N
3 P OP2 P O sing 1.61 N N
4 P O5' P O sing 1.61 N N
5 OP3 HOP3 O H sing 0.97 N N
6 OP2 HOP2 O H sing 0.97 N N
7 O5' C5' O C sing 1.43 N N
8 C6 N1 C N sing 1.37 N N
9 N1 C2 N C sing 1.35 N N
10 N1 C1' N C sing 1.46 N N
11 C5 C6 C C doub 1.35 N N
12 C6 H6 C H sing 1.08 N N
13 N3 C2 N C sing 1.35 N N
14 C2 O2 C O doub 1.22 N N
15 C4 N3 C N sing 1.35 N N
16 O4 C4 O C doub 1.22 N N
17 C5 C4 C C sing 1.42 N N
18 C5 H5 C H sing 1.08 N N
19 C2' F2' C F sing 1.4 N N
20 C3' C2' C C sing 1.54 N N
21 C2' C1' C C sing 1.54 N N
22 C2' H2' C H sing 1.09 N N
23 C5' C4' C C sing 1.53 N N
24 C5' H5' C H sing 1.09 N N
25 C5' H5'A C H sing 1.09 N N
26 C3' C4' C C sing 1.54 N N
27 C4' O4' C O sing 1.44 N N
28 C4' H4' C H sing 1.09 N N
29 O4' C1' O C sing 1.44 N N
30 C1' H1' C H sing 1.09 N N
31 C3' O3' C O sing 1.43 N N
32 C3' H3' C H sing 1.09 N N
33 O3' HO3' O H sing 0.97 N N
34 N3 HN3 N H sing 0.97 N N