Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : TOY    

Bonds between two atoms of the molecule

Total Number of Bonds: 71


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C11 O11 C O sing 1.43 N N
2 C11 C21 C C sing 1.53 N N
3 C11 O51 C O sing 1.43 N N
4 C11 H11 C H sing 1.09 N N
5 O11 C42 O C sing 1.43 N N
6 C21 N21 C N sing 1.47 N N
7 C21 C31 C C sing 1.53 N N
8 C21 H21 C H sing 1.09 N N
9 N21 HN21 N H sing 1.01 N N
10 N21 HN22 N H sing 1.01 N N
11 C31 C41 C C sing 1.53 N N
12 C31 H311 C H sing 1.09 N N
13 C31 H312 C H sing 1.09 N N
14 C41 O41 C O sing 1.43 N N
15 C41 C51 C C sing 1.53 N N
16 C41 H41 C H sing 1.09 N N
17 O41 H41O O H sing 0.97 N N
18 C51 O51 C O sing 1.43 N N
19 C51 C61 C C sing 1.53 N N
20 C51 H51 C H sing 1.09 N N
21 C61 N61 C N sing 1.47 N N
22 C61 H611 C H sing 1.09 N N
23 C61 H612 C H sing 1.09 N N
24 N61 HN61 N H sing 1.01 N N
25 N61 HN62 N H sing 1.01 N N
26 C12 N12 C N sing 1.47 N N
27 C12 C22 C C sing 1.53 N N
28 C12 C62 C C sing 1.53 N N
29 C12 H12 C H sing 1.09 N N
30 N12 HN11 N H sing 1.01 N N
31 N12 HN12 N H sing 1.01 N N
32 C22 C32 C C sing 1.53 N N
33 C22 H221 C H sing 1.09 N N
34 C22 H222 C H sing 1.09 N N
35 C32 N32 C N sing 1.47 N N
36 C32 C42 C C sing 1.53 N N
37 C32 H32 C H sing 1.09 N N
38 N32 HN1 N H sing 1.01 N N
39 N32 HN2 N H sing 1.01 N N
40 C42 C52 C C sing 1.53 N N
41 C42 H42 C H sing 1.09 N N
42 C52 O52 C O sing 1.43 N N
43 C52 C62 C C sing 1.53 N N
44 C52 H52 C H sing 1.09 N N
45 O52 H52O O H sing 0.97 N N
46 C62 O62 C O sing 1.43 N N
47 C62 H62 C H sing 1.09 N N
48 O62 C13 O C sing 1.43 N N
49 C13 C23 C C sing 1.53 N N
50 C13 O53 C O sing 1.43 N N
51 C13 H13 C H sing 1.09 N N
52 C23 O23 C O sing 1.43 N N
53 C23 C33 C C sing 1.53 N N
54 C23 H23 C H sing 1.09 N N
55 O23 H23O O H sing 0.97 N N
56 C33 N33 C N sing 1.47 N N
57 C33 C43 C C sing 1.53 N N
58 C33 H33 C H sing 1.09 N N
59 N33 HN31 N H sing 1.01 N N
60 N33 HN32 N H sing 1.01 N N
61 C43 O43 C O sing 1.43 N N
62 C43 C53 C C sing 1.53 N N
63 C43 H43 C H sing 1.09 N N
64 O43 H43O O H sing 0.97 N N
65 C53 O53 C O sing 1.43 N N
66 C53 C63 C C sing 1.53 N N
67 C53 H53 C H sing 1.09 N N
68 C63 O63 C O sing 1.43 N N
69 C63 H631 C H sing 1.09 N N
70 C63 H632 C H sing 1.09 N N
71 O63 H63O O H sing 0.97 N N