Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : Q6B    

Bonds between two atoms of the molecule

Total Number of Bonds: 123


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C34 C16 C C sing 1.51 N N
2 C16 C15 C C sing 1.4 N N
3 C16 C17 C C doub 1.37 E N
4 C41 C40 C C sing 1.53 N N
5 C15 C14 C C doub 1.36 E N
6 C33 C18 C C sing 1.51 N N
7 C39 C07 C C sing 1.51 N N
8 C07 C06 C C doub 1.31 Z N
9 C07 C08 C C sing 1.5 N N
10 C18 C17 C C sing 1.4 N N
11 C18 C19 C C doub 1.36 E N
12 O13 C12 O C doub 1.22 N N
13 C06 C05 C C sing 1.5 N N
14 C53 C43 C C sing 1.51 N N
15 C08 C09 C C sing 1.52 N N
16 C32 C22 C C sing 1.51 N N
17 C20 C19 C C sing 1.41 N N
18 C20 C21 C C doub 1.36 E N
19 C14 C12 C C sing 1.41 N N
20 C40 C42 C C sing 1.53 N N
21 C40 C04 C C sing 1.53 N N
22 C05 C04 C C sing 1.53 N N
23 C12 O11 C O sing 1.35 N N
24 C42 C43 C C sing 1.51 N N
25 C43 C44 C C doub 1.31 Z N
26 C04 O03 C O sing 1.45 N N
27 C21 C22 C C sing 1.42 N N
28 C22 C23 C C doub 1.34 E N
29 C09 C38 C C sing 1.53 N N
30 C09 C10 C C sing 1.53 N N
31 O11 C10 O C sing 1.43 N N
32 C10 C35 C C sing 1.52 N N
33 O25 C24 O C sing 1.43 N N
34 C44 C45 C C sing 1.51 N N
35 C23 C24 C C sing 1.51 N N
36 O03 C02 O C sing 1.33 N N
37 C24 C26 C C sing 1.53 N N
38 C02 O01 C O doub 1.22 N N
39 C02 C37 C C sing 1.5 N N
40 C35 C36 C C sing 1.53 N N
41 C36 C37 C C sing 1.53 N N
42 C31 C29 C C sing 1.53 N N
43 C45 C46 C C sing 1.53 N N
44 C45 C47 C C sing 1.53 N N
45 C26 C28 C C sing 1.53 N N
46 C26 O27 C O sing 1.43 N N
47 C49 C47 C C sing 1.53 N N
48 C49 C50 C C sing 1.53 N N
49 C29 C28 C C sing 1.53 N N
50 C29 O30 C O sing 1.43 N N
51 C52 C50 C C sing 1.53 N N
52 C47 O48 C O sing 1.43 N N
53 C50 O51 C O sing 1.43 N N
54 C10 H1 C H sing 1.1 N N
55 C14 H2 C H sing 1.08 N N
56 C15 H3 C H sing 1.08 N N
57 C17 H4 C H sing 1.08 N N
58 C19 H5 C H sing 1.08 N N
59 O25 H6 O H sing 0.97 N N
60 O27 H7 O H sing 0.97 N N
61 O30 H8 O H sing 0.97 N N
62 C04 H9 C H sing 1.09 N N
63 C05 H10 C H sing 1.09 N N
64 C05 H11 C H sing 1.09 N N
65 C06 H12 C H sing 1.08 N N
66 C08 H13 C H sing 1.09 N N
67 C08 H14 C H sing 1.09 N N
68 C09 H15 C H sing 1.1 N N
69 C20 H16 C H sing 1.08 N N
70 C21 H17 C H sing 1.08 N N
71 C23 H18 C H sing 1.08 N N
72 C24 H19 C H sing 1.09 N N
73 C26 H20 C H sing 1.09 N N
74 C28 H21 C H sing 1.09 N N
75 C28 H22 C H sing 1.09 N N
76 C29 H23 C H sing 1.09 N N
77 C31 H24 C H sing 1.09 N N
78 C31 H25 C H sing 1.09 N N
79 C31 H26 C H sing 1.09 N N
80 C32 H27 C H sing 1.09 N N
81 C32 H28 C H sing 1.09 N N
82 C32 H29 C H sing 1.09 N N
83 C33 H30 C H sing 1.09 N N
84 C33 H31 C H sing 1.09 N N
85 C33 H32 C H sing 1.09 N N
86 C34 H33 C H sing 1.09 N N
87 C34 H34 C H sing 1.09 N N
88 C34 H35 C H sing 1.09 N N
89 C35 H36 C H sing 1.08 N N
90 C35 H37 C H sing 1.11 N N
91 C36 H38 C H sing 1.1 N N
92 C36 H39 C H sing 1.08 N N
93 C37 H40 C H sing 1.1 N N
94 C37 H41 C H sing 1.09 N N
95 C38 H42 C H sing 1.09 N N
96 C38 H43 C H sing 1.09 N N
97 C38 H44 C H sing 1.09 N N
98 C39 H45 C H sing 1.09 N N
99 C39 H46 C H sing 1.09 N N
100 C39 H47 C H sing 1.09 N N
101 C40 H48 C H sing 1.09 N N
102 C41 H49 C H sing 1.09 N N
103 C41 H50 C H sing 1.09 N N
104 C41 H51 C H sing 1.09 N N
105 C42 H52 C H sing 1.09 N N
106 C42 H53 C H sing 1.09 N N
107 C44 H54 C H sing 1.08 N N
108 C45 H55 C H sing 1.09 N N
109 C46 H56 C H sing 1.09 N N
110 C46 H57 C H sing 1.09 N N
111 C46 H58 C H sing 1.09 N N
112 C47 H59 C H sing 1.09 N N
113 C49 H60 C H sing 1.09 N N
114 C49 H61 C H sing 1.09 N N
115 C50 H62 C H sing 1.09 N N
116 C52 H63 C H sing 1.09 N N
117 C52 H64 C H sing 1.09 N N
118 C52 H65 C H sing 1.09 N N
119 C53 H66 C H sing 1.09 N N
120 C53 H67 C H sing 1.09 N N
121 C53 H68 C H sing 1.09 N N
122 O48 H69 O H sing 0.97 N N
123 O51 H70 O H sing 0.97 N N