Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : PCJ    

Bonds between two atoms of the molecule

Total Number of Bonds: 166


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CB CA C C sing 1.53 N N
2 CB SG C S sing 1.81 N N
3 CB HB1 C H sing 1.09 N N
4 CB HB2 C H sing 1.09 N N
5 SG C1 S C sing 1.81 N N
6 C CA C C sing 1.53 N N
7 C O C O sing 1.43 N N
8 C H1 C H sing 1.09 N N
9 C H2A C H sing 1.09 N N
10 O HO O H sing 0.97 N N
11 N C66 N C sing 1.35 N N
12 N CA N C sing 1.47 N N
13 N HN N H sing 0.97 N N
14 CA HA C H sing 1.09 N N
15 C1 C2 C C sing 1.53 N N
16 C1 H11 C H sing 1.09 N N
17 C1 H12 C H sing 1.09 N N
18 C2 C3 C C sing 1.53 N N
19 C2 O2 C O sing 1.45 N N
20 C2 H2 C H sing 1.09 N N
21 O2 C46 O C sing 1.34 N N
22 C3 O3 C O sing 1.45 N N
23 C3 H31 C H sing 1.09 N N
24 C3 H32 C H sing 1.09 N N
25 O3 C26 O C sing 1.34 N N
26 C11 C12 C C sing 1.53 N N
27 C11 H111 C H sing 1.09 N N
28 C11 H112 C H sing 1.09 N N
29 C11 H113 C H sing 1.09 N N
30 C12 C13 C C sing 1.53 N N
31 C12 H121 C H sing 1.09 N N
32 C12 H122 C H sing 1.09 N N
33 C13 C14 C C sing 1.53 N N
34 C13 H131 C H sing 1.09 N N
35 C13 H132 C H sing 1.09 N N
36 C14 C15 C C sing 1.53 N N
37 C14 H141 C H sing 1.09 N N
38 C14 H142 C H sing 1.09 N N
39 C15 C16 C C sing 1.53 N N
40 C15 H151 C H sing 1.09 N N
41 C15 H152 C H sing 1.09 N N
42 C16 C17 C C sing 1.53 N N
43 C16 H161 C H sing 1.09 N N
44 C16 H162 C H sing 1.09 N N
45 C17 C18 C C sing 1.53 N N
46 C17 H171 C H sing 1.09 N N
47 C17 H172 C H sing 1.09 N N
48 C18 C19 C C sing 1.53 N N
49 C18 H181 C H sing 1.09 N N
50 C18 H182 C H sing 1.09 N N
51 C19 C20 C C sing 1.53 N N
52 C19 H191 C H sing 1.09 N N
53 C19 H192 C H sing 1.09 N N
54 C20 C21 C C sing 1.53 N N
55 C20 H201 C H sing 1.09 N N
56 C20 H202 C H sing 1.09 N N
57 C21 C22 C C sing 1.53 N N
58 C21 H211 C H sing 1.09 N N
59 C21 H212 C H sing 1.09 N N
60 C22 C23 C C sing 1.53 N N
61 C22 H221 C H sing 1.09 N N
62 C22 H222 C H sing 1.09 N N
63 C23 C24 C C sing 1.53 N N
64 C23 H231 C H sing 1.09 N N
65 C23 H232 C H sing 1.09 N N
66 C24 C25 C C sing 1.53 N N
67 C24 H241 C H sing 1.09 N N
68 C24 H242 C H sing 1.09 N N
69 C25 C26 C C sing 1.51 N N
70 C25 H251 C H sing 1.09 N N
71 C25 H252 C H sing 1.09 N N
72 C26 O28 C O doub 1.21 N N
73 C31 C32 C C sing 1.53 N N
74 C31 H311 C H sing 1.09 N N
75 C31 H312 C H sing 1.09 N N
76 C31 H313 C H sing 1.09 N N
77 C32 C33 C C sing 1.53 N N
78 C32 H321 C H sing 1.09 N N
79 C32 H322 C H sing 1.09 N N
80 C33 C34 C C sing 1.53 N N
81 C33 H331 C H sing 1.09 N N
82 C33 H332 C H sing 1.09 N N
83 C34 C35 C C sing 1.53 N N
84 C34 H341 C H sing 1.09 N N
85 C34 H342 C H sing 1.09 N N
86 C35 C36 C C sing 1.53 N N
87 C35 H351 C H sing 1.09 N N
88 C35 H352 C H sing 1.09 N N
89 C36 C37 C C sing 1.53 N N
90 C36 H361 C H sing 1.09 N N
91 C36 H362 C H sing 1.09 N N
92 C37 C38 C C sing 1.53 N N
93 C37 H371 C H sing 1.09 N N
94 C37 H372 C H sing 1.09 N N
95 C38 C39 C C sing 1.53 N N
96 C38 H381 C H sing 1.09 N N
97 C38 H382 C H sing 1.09 N N
98 C39 C40 C C sing 1.53 N N
99 C39 H391 C H sing 1.09 N N
100 C39 H392 C H sing 1.09 N N
101 C40 C41 C C sing 1.53 N N
102 C40 H401 C H sing 1.09 N N
103 C40 H402 C H sing 1.09 N N
104 C41 C42 C C sing 1.53 N N
105 C41 H411 C H sing 1.09 N N
106 C41 H412 C H sing 1.09 N N
107 C42 C43 C C sing 1.53 N N
108 C42 H421 C H sing 1.09 N N
109 C42 H422 C H sing 1.09 N N
110 C43 C44 C C sing 1.53 N N
111 C43 H431 C H sing 1.09 N N
112 C43 H432 C H sing 1.09 N N
113 C44 C45 C C sing 1.53 N N
114 C44 H441 C H sing 1.09 N N
115 C44 H442 C H sing 1.09 N N
116 C45 C46 C C sing 1.51 N N
117 C45 H451 C H sing 1.09 N N
118 C45 H452 C H sing 1.09 N N
119 C46 O47 C O doub 1.21 N N
120 C51 C52 C C sing 1.53 N N
121 C51 H511 C H sing 1.09 N N
122 C51 H512 C H sing 1.09 N N
123 C51 H513 C H sing 1.09 N N
124 C52 C53 C C sing 1.53 N N
125 C52 H521 C H sing 1.09 N N
126 C52 H522 C H sing 1.09 N N
127 C53 C54 C C sing 1.53 N N
128 C53 H531 C H sing 1.09 N N
129 C53 H532 C H sing 1.09 N N
130 C54 C55 C C sing 1.53 N N
131 C54 H541 C H sing 1.09 N N
132 C54 H542 C H sing 1.09 N N
133 C55 C56 C C sing 1.53 N N
134 C55 H551 C H sing 1.09 N N
135 C55 H552 C H sing 1.09 N N
136 C56 C57 C C sing 1.53 N N
137 C56 H561 C H sing 1.09 N N
138 C56 H562 C H sing 1.09 N N
139 C57 C58 C C sing 1.53 N N
140 C57 H571 C H sing 1.09 N N
141 C57 H572 C H sing 1.09 N N
142 C58 C59 C C sing 1.53 N N
143 C58 H581 C H sing 1.09 N N
144 C58 H582 C H sing 1.09 N N
145 C59 C60 C C sing 1.53 N N
146 C59 H591 C H sing 1.09 N N
147 C59 H592 C H sing 1.09 N N
148 C60 C61 C C sing 1.53 N N
149 C60 H601 C H sing 1.09 N N
150 C60 H602 C H sing 1.09 N N
151 C61 C62 C C sing 1.53 N N
152 C61 H611 C H sing 1.09 N N
153 C61 H612 C H sing 1.09 N N
154 C62 C63 C C sing 1.53 N N
155 C62 H621 C H sing 1.09 N N
156 C62 H622 C H sing 1.09 N N
157 C63 C64 C C sing 1.53 N N
158 C63 H631 C H sing 1.09 N N
159 C63 H632 C H sing 1.09 N N
160 C64 C65 C C sing 1.53 N N
161 C64 H641 C H sing 1.09 N N
162 C64 H642 C H sing 1.09 N N
163 C65 C66 C C sing 1.51 N N
164 C65 H651 C H sing 1.09 N N
165 C65 H652 C H sing 1.09 N N
166 C66 O67 C O doub 1.21 N N