Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : PBI    

Bonds between two atoms of the molecule

Total Number of Bonds: 35


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N1 CA1 N C sing 1.47 N N
2 N1 HN11 N H sing 1.01 N N
3 N1 HN12 N H sing 1.01 N N
4 CA1 C1 C C sing 1.51 N N
5 CA1 HA11 C H sing 1.09 N N
6 CA1 HA12 C H sing 1.09 N N
7 C1 N2 C N doub 1.29 N N
8 C1 N3 C N sing 1.37 N N
9 N2 CA2 N C sing 1.47 N N
10 N3 C2 N C sing 1.35 N N
11 N3 CA3 N C sing 1.47 N N
12 C2 O2 C O doub 1.21 N N
13 C2 CA2 C C sing 1.52 N N
14 CA2 CB2 C C sing 1.53 N N
15 CA2 HA2 C H sing 1.09 N N
16 CA3 C3 C C sing 1.51 N N
17 CA3 HA31 C H sing 1.09 N N
18 CA3 HA32 C H sing 1.09 N N
19 C3 O3 C O doub 1.21 N N
20 C3 HC3 C H sing 1.08 N N
21 CB2 CG2 C C sing 1.53 N N
22 CB2 HB21 C H sing 1.09 N N
23 CB2 HB22 C H sing 1.09 N N
24 CG2 CD1 C C sing 1.5 N N
25 CG2 CD2 C C sing 1.5 N N
26 CG2 HG2 C H sing 1.09 N N
27 CD1 CE1 C C doub 1.33 N N
28 CD1 HD1 C H sing 1.08 N N
29 CD2 CE2 C C doub 1.33 N N
30 CD2 HD2 C H sing 1.08 N N
31 CE1 CZ C C sing 1.47 N N
32 CE1 HE1 C H sing 1.08 N N
33 CE2 CZ C C sing 1.47 N N
34 CE2 HE2 C H sing 1.08 N N
35 CZ OH C O doub 1.22 N N