Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
P31
Bonds between two atoms of the molecule
Total Number of Bonds: 47
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
F43
C40
F
C
sing
1.4
N
N
2
C40
F42
C
F
sing
1.4
N
N
3
C40
C35
C
C
sing
1.51
N
N
4
C40
F41
C
F
sing
1.4
N
N
5
C35
C36
C
C
doub
1.38
N
Y
6
C35
N34
C
N
sing
1.32
N
Y
7
C36
C38
C
C
sing
1.39
N
Y
8
N34
C32
N
C
doub
1.32
N
Y
9
C38
C29
C
C
doub
1.39
N
Y
10
C32
C29
C
C
sing
1.38
N
Y
11
C29
C26
C
C
sing
1.51
N
N
12
C26
N24
C
N
sing
1.46
N
N
13
N18
C16
N
C
doub
1.32
N
Y
14
N18
C19
N
C
sing
1.32
N
Y
15
C16
C15
C
C
sing
1.38
N
Y
16
N24
C19
N
C
sing
1.39
N
N
17
C19
C20
C
C
doub
1.39
N
Y
18
C15
C12
C
C
sing
1.51
N
N
19
C15
C22
C
C
doub
1.39
N
Y
20
C12
C11
C
C
sing
1.51
N
N
21
C20
C22
C
C
sing
1.38
N
Y
22
C11
C7
C
C
sing
1.46
N
Y
23
C11
C30
C
C
doub
1.34
N
Y
24
C5
C7
C
C
doub
1.4
N
Y
25
C5
C1
C
C
sing
1.38
N
Y
26
CL1
C1
CL
C
sing
1.74
N
N
27
C7
C8
C
C
sing
1.41
N
Y
28
C1
C2
C
C
doub
1.39
N
Y
29
C30
N9
C
N
sing
1.37
N
Y
30
C8
N9
C
N
sing
1.38
N
Y
31
C8
N4
C
N
doub
1.33
N
Y
32
C2
N4
C
N
sing
1.32
N
Y
33
C2
H1
C
H
sing
1.08
N
N
34
C5
H2
C
H
sing
1.08
N
N
35
N9
H3
N
H
sing
0.97
N
N
36
C12
H4
C
H
sing
1.09
N
N
37
C12
H5
C
H
sing
1.09
N
N
38
C16
H6
C
H
sing
1.08
N
N
39
C20
H7
C
H
sing
1.08
N
N
40
C22
H8
C
H
sing
1.08
N
N
41
N24
H9
N
H
sing
0.97
N
N
42
C26
H10
C
H
sing
1.09
N
N
43
C26
H11
C
H
sing
1.09
N
N
44
C30
H12
C
H
sing
1.08
N
N
45
C32
H13
C
H
sing
1.08
N
N
46
C36
H14
C
H
sing
1.08
N
N
47
C38
H15
C
H
sing
1.08
N
N