Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : OBY    

Bonds between two atoms of the molecule

Total Number of Bonds: 43


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C9 C8 C C doub 1.38 N Y
2 C9 C10 C C sing 1.4 N Y
3 C8 C7 C C sing 1.38 N Y
4 C10 S2 C S sing 1.76 N Y
5 C10 C11 C C doub 1.4 N Y
6 S2 C12 S C sing 1.75 N Y
7 C7 C6 C C doub 1.39 N Y
8 O2 C14 O C doub 1.21 N N
9 C11 C6 C C sing 1.43 N Y
10 C11 C13 C C sing 1.41 N Y
11 C6 C3 C C sing 1.47 N N
12 C12 C13 C C doub 1.33 N Y
13 C12 N2 C N sing 1.39 N N
14 C14 N2 C N sing 1.35 N N
15 C14 C17 C C sing 1.51 N N
16 C3 S1 C S sing 1.76 N Y
17 C3 C4 C C doub 1.37 N Y
18 S1 C2 S C sing 1.76 N Y
19 C4 C5 C C sing 1.37 N Y
20 C2 C5 C C doub 1.37 N Y
21 C2 C1 C C sing 1.46 N N
22 O1 C1 O C doub 1.22 N N
23 C1 N1 C N sing 1.35 N N
24 N1 C15 N C sing 1.46 N N
25 C15 C18 C C sing 1.53 N N
26 C15 C16 C C sing 1.53 N N
27 C18 C16 C C sing 1.53 N N
28 N1 H1 N H sing 0.97 N N
29 C4 H4 C H sing 1.08 N N
30 C5 H6 C H sing 1.08 N N
31 C7 H8 C H sing 1.08 N N
32 C8 H9 C H sing 1.08 N N
33 C9 H10 C H sing 1.08 N N
34 C13 H11 C H sing 1.08 N N
35 N2 H12 N H sing 0.97 N N
36 C15 H13 C H sing 1.09 N N
37 C16 H14 C H sing 1.09 N N
38 C16 H15 C H sing 1.09 N N
39 C17 H16 C H sing 1.09 N N
40 C17 H17 C H sing 1.09 N N
41 C17 H18 C H sing 1.09 N N
42 C18 H19 C H sing 1.09 N N
43 C18 H20 C H sing 1.09 N N