Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : O9I    

Bonds between two atoms of the molecule

Total Number of Bonds: 61


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O C O C sing 1.36 N N
2 C C1 C C sing 1.39 N Y
3 C1 C2 C C doub 1.38 N Y
4 C C3 C C doub 1.39 N Y
5 O1 C3 O C sing 1.36 N N
6 C3 C4 C C sing 1.39 N Y
7 C4 C5 C C doub 1.38 N Y
8 C2 C5 C C sing 1.38 N Y
9 C5 S C S sing 1.76 N N
10 C6 S C S sing 1.76 N N
11 C6 C7 C C doub 1.38 N Y
12 C7 C8 C C sing 1.38 N Y
13 C8 C9 C C doub 1.38 N Y
14 C10 C9 C C sing 1.51 N N
15 N C10 N C sing 1.47 N N
16 S1 N S N sing 1.66 N N
17 O2 S1 O S doub 1.42 N N
18 C11 S1 C S sing 1.76 N N
19 C11 C12 C C doub 1.38 N Y
20 C12 C13 C C sing 1.39 N Y
21 O3 C13 O C sing 1.36 N N
22 C13 C14 C C doub 1.39 N Y
23 O4 C14 O C sing 1.36 N N
24 C14 C15 C C sing 1.38 N Y
25 C15 C16 C C doub 1.39 N Y
26 C16 C11 C C sing 1.39 N Y
27 C17 C16 C C sing 1.48 N N
28 C17 C18 C C doub 1.39 N Y
29 C18 C19 C C sing 1.38 N Y
30 C19 C20 C C doub 1.39 N Y
31 O5 C20 O C sing 1.36 N N
32 C20 C21 C C sing 1.39 N Y
33 C21 C22 C C doub 1.38 N Y
34 C22 C17 C C sing 1.39 N Y
35 O6 S1 O S doub 1.42 N N
36 C9 C23 C C sing 1.38 N Y
37 C23 C24 C C doub 1.38 N Y
38 C24 C6 C C sing 1.38 N Y
39 O7 S O S doub 1.42 N N
40 S O8 S O doub 1.42 N N
41 C1 H1 C H sing 1.08 N N
42 C2 H2 C H sing 1.08 N N
43 C4 H4 C H sing 1.08 N N
44 C7 H5 C H sing 1.08 N N
45 C8 H6 C H sing 1.08 N N
46 C10 H7 C H sing 1.09 N N
47 C10 H8 C H sing 1.09 N N
48 C15 H13 C H sing 1.08 N N
49 C18 H14 C H sing 1.08 N N
50 C19 H15 C H sing 1.08 N N
51 C21 H17 C H sing 1.08 N N
52 C22 H18 C H sing 1.08 N N
53 C23 H19 C H sing 1.08 N N
54 O1 H3 O H sing 0.97 N N
55 O H O H sing 0.97 N N
56 C24 H20 C H sing 1.08 N N
57 N H9 N H sing 0.97 N N
58 O4 H12 O H sing 0.97 N N
59 O3 H11 O H sing 0.97 N N
60 C12 H10 C H sing 1.08 N N
61 O5 H16 O H sing 0.97 N N