Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : O61    

Bonds between two atoms of the molecule

Total Number of Bonds: 67


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C6 C1 C C doub 1.39 N Y
2 C2 C1 C C sing 1.38 N Y
3 C1 H1 C H sing 1.08 N N
4 C3 C2 C C doub 1.38 N Y
5 C2 H2 C H sing 1.08 N N
6 C4 C3 C C sing 1.38 N Y
7 CL7 C3 CL C sing 1.74 N N
8 C4 C5 C C doub 1.38 N Y
9 C4 H4 C H sing 1.08 N N
10 C13 C5 C C sing 1.51 N N
11 C5 C6 C C sing 1.39 N Y
12 C6 N8 C N sing 1.4 N N
13 N12 N8 N N sing 1.41 N Y
14 N8 C9 N C sing 1.35 N Y
15 N10 C9 N C doub 1.31 N Y
16 C9 H9 C H sing 1.08 N N
17 N11 N10 N N sing 1.28 N Y
18 N12 N11 N N doub 1.29 N Y
19 C13 C14 C C sing 1.53 N N
20 C13 H13 C H sing 1.09 N N
21 C13 H13A C H sing 1.09 N N
22 N15 C14 N C sing 1.46 N N
23 C14 H14 C H sing 1.09 N N
24 C14 H14A C H sing 1.09 N N
25 N15 C16 N C sing 1.35 N N
26 N15 HN15 N H sing 0.97 N N
27 C17 C16 C C sing 1.51 N N
28 C16 O39 C O doub 1.21 N N
29 C18 C17 C C sing 1.53 N N
30 C17 N19 C N sing 1.47 N N
31 C17 H17 C H sing 1.09 N N
32 C33 C18 C C sing 1.51 N N
33 C18 H18 C H sing 1.09 N N
34 C18 H18A C H sing 1.09 N N
35 N19 C20 N C sing 1.35 N N
36 N19 HN19 N H sing 0.97 N N
37 O22 C20 O C doub 1.22 N N
38 C20 C21 C C sing 1.48 N N
39 C23 C21 C C doub 1.4 N Y
40 C21 C25 C C sing 1.4 N Y
41 C23 C24 C C sing 1.38 N Y
42 C23 H23 C H sing 1.08 N N
43 C24 C27 C C doub 1.39 N Y
44 C24 H24 C H sing 1.08 N N
45 C25 C26 C C doub 1.38 N Y
46 C25 H25 C H sing 1.08 N N
47 C27 C26 C C sing 1.4 N Y
48 C26 S31 C S sing 1.76 N N
49 C27 N28 C N sing 1.39 N N
50 N28 C29 N C sing 1.33 N N
51 N28 HN28 N H sing 0.97 N N
52 C30 C29 C C sing 1.5 N N
53 C29 O32 C O doub 1.21 N N
54 S31 C30 S C sing 1.82 N N
55 C30 H30 C H sing 1.09 N N
56 C30 H30A C H sing 1.09 N N
57 C34 C33 C C doub 1.38 N Y
58 C38 C33 C C sing 1.38 N Y
59 C35 C34 C C sing 1.38 N Y
60 C34 H34 C H sing 1.08 N N
61 C36 C35 C C doub 1.38 N Y
62 C35 H35 C H sing 1.08 N N
63 C36 C37 C C sing 1.38 N Y
64 C36 H36 C H sing 1.08 N N
65 C37 C38 C C doub 1.38 N Y
66 C37 H37 C H sing 1.08 N N
67 C38 H38 C H sing 1.08 N N