Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : O0E    

Bonds between two atoms of the molecule

Total Number of Bonds: 68


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C21 C20 C C doub 1.36 N Y
2 C21 C22 C C sing 1.39 N Y
3 C20 C19 C C sing 1.41 N Y
4 C22 C23 C C doub 1.36 N Y
5 C19 C24 C C doub 1.4 N Y
6 C19 C18 C C sing 1.42 N Y
7 C23 C18 C C sing 1.41 N Y
8 C24 C C C sing 1.38 N Y
9 C18 C17 C C doub 1.4 N Y
10 C N C N sing 1.39 N N
11 C C1 C C doub 1.41 N Y
12 C17 C1 C C sing 1.38 N Y
13 C1 C2 C C sing 1.48 N N
14 C6 N2 C N sing 1.37 N Y
15 C6 C5 C C doub 1.35 N Y
16 N2 C7 N C sing 1.35 N Y
17 C2 N1 C N sing 1.35 N N
18 C2 O3 C O doub 1.22 N N
19 N1 C3 N C sing 1.46 N N
20 C5 C4 C C sing 1.51 N N
21 C5 N3 C N sing 1.34 N Y
22 C7 N3 C N doub 1.3 N Y
23 C4 C3 C C sing 1.53 N N
24 C3 C8 C C sing 1.51 N N
25 O2 C8 O C doub 1.21 N N
26 C8 N4 C N sing 1.35 N N
27 C13 C11 C C sing 1.53 N N
28 C11 N5 C N sing 1.47 N N
29 C11 C12 C C sing 1.51 N N
30 N4 C9 N C sing 1.47 N N
31 N4 C16 N C sing 1.47 N N
32 O1 C10 O C doub 1.21 N N
33 N5 C10 N C sing 1.35 N N
34 N6 C12 N C sing 1.35 N N
35 C10 C9 C C sing 1.51 N N
36 C9 C14 C C sing 1.55 N N
37 C16 C15 C C sing 1.54 N N
38 C12 O C O doub 1.21 N N
39 C14 C15 C C sing 1.55 N N
40 N H4 N H sing 0.97 N N
41 N H3 N H sing 0.97 N N
42 C11 H2 C H sing 1.09 N N
43 C13 H15 C H sing 1.09 N N
44 C13 H16 C H sing 1.09 N N
45 C13 H14 C H sing 1.09 N N
46 C14 H18 C H sing 1.09 N N
47 C14 H17 C H sing 1.09 N N
48 C15 H20 C H sing 1.09 N N
49 C15 H19 C H sing 1.09 N N
50 C16 H22 C H sing 1.09 N N
51 C16 H21 C H sing 1.09 N N
52 C17 H23 C H sing 1.08 N N
53 C20 H24 C H sing 1.08 N N
54 C21 H25 C H sing 1.08 N N
55 C22 H26 C H sing 1.08 N N
56 C23 H27 C H sing 1.08 N N
57 C24 H28 C H sing 1.08 N N
58 C3 H C H sing 1.09 N N
59 C4 H6 C H sing 1.09 N N
60 C4 H7 C H sing 1.09 N N
61 C6 H8 C H sing 1.08 N N
62 C7 H10 C H sing 1.08 N N
63 C9 H1 C H sing 1.09 N N
64 N1 H5 N H sing 0.97 N N
65 N2 H9 N H sing 0.97 N N
66 N5 H11 N H sing 0.97 N N
67 N6 H12 N H sing 0.97 N N
68 N6 H13 N H sing 0.97 N N