Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : ML1    

Bonds between two atoms of the molecule

Total Number of Bonds: 34


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C6 C C sing 1.53 N N
2 C1 N1 C N sing 1.46 N N
3 C1 H11 C H sing 1.09 N N
4 C1 H12A C H sing 1.09 N N
5 C2 C7 C C doub 1.34 N Y
6 C2 H2 C H sing 1.08 N N
7 C3 H31 C H sing 1.09 N N
8 C3 H32 C H sing 1.09 N N
9 C3 H33 C H sing 1.09 N N
10 C4 N1 C N sing 1.35 N N
11 C5 C4 C C sing 1.51 N N
12 C5 H51 C H sing 1.09 N N
13 C5 H52 C H sing 1.09 N N
14 C5 H53 C H sing 1.09 N N
15 C6 H61 C H sing 1.09 N N
16 C6 H62 C H sing 1.09 N N
17 C8 C9 C C sing 1.4 N Y
18 C8 C7 C C sing 1.47 N Y
19 C9 H9 C H sing 1.08 N N
20 C12 C11 C C doub 1.38 N Y
21 C12 C13 C C sing 1.39 N Y
22 C12 H12 C H sing 1.08 N N
23 C13 C8 C C doub 1.41 N Y
24 C7 C6 C C sing 1.51 N N
25 C10 O1 C O sing 1.36 N N
26 C10 C9 C C doub 1.38 N Y
27 C11 C10 C C sing 1.39 N Y
28 C11 H111 C H sing 1.08 N N
29 N1 HN1 N H sing 0.97 N N
30 N2 C13 N C sing 1.38 N Y
31 N2 C2 N C sing 1.37 N Y
32 O1 C3 O C sing 1.43 N N
33 O2 C4 O C doub 1.21 N N
34 N2 H16 N H sing 0.97 N N