Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : KDM    

Bonds between two atoms of the molecule

Total Number of Bonds: 34


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C2 C1 C C sing 1.51 N N
2 C2 C3 C C sing 1.53 N N
3 C2 O6 C O sing 1.43 N N
4 C2 O2 C O sing 1.43 N N
5 C1 O1B C O sing 1.34 N N
6 C1 O1A C O doub 1.21 N N
7 C3 C4 C C sing 1.53 N N
8 C4 C5 C C sing 1.53 N N
9 C4 O4 C O sing 1.43 N N
10 C5 C6 C C sing 1.53 N N
11 C5 O5 C O sing 1.43 N N
12 C6 C7 C C sing 1.53 N N
13 C6 O6 C O sing 1.43 N N
14 C7 C8 C C sing 1.53 N N
15 C7 O7 C O sing 1.43 N N
16 C8 C9 C C sing 1.53 N N
17 C8 O8 C O sing 1.43 N N
18 C9 O9 C O sing 1.43 N N
19 C3 H31 C H sing 1.09 N N
20 C3 H32 C H sing 1.09 N N
21 O2 HO2 O H sing 0.97 N N
22 O1B HO1B O H sing 0.97 N N
23 C4 H4 C H sing 1.09 N N
24 C5 H5 C H sing 1.09 N N
25 O4 HO4 O H sing 0.97 N N
26 C6 H6 C H sing 1.09 N N
27 O5 HO5 O H sing 0.97 N N
28 C7 H7 C H sing 1.09 N N
29 C8 H8 C H sing 1.09 N N
30 O7 HO7 O H sing 0.97 N N
31 C9 H91 C H sing 1.09 N N
32 C9 H92 C H sing 1.09 N N
33 O8 HO8 O H sing 0.97 N N
34 O9 HO9 O H sing 0.97 N N