Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : JS0    

Bonds between two atoms of the molecule

Total Number of Bonds: 52


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C13 C12 C C sing 1.53 N N
2 C13 C14 C C sing 1.53 N N
3 O11 C12 O C sing 1.43 N N
4 O11 C10 O C sing 1.36 N N
5 O01 C02 O C sing 1.43 N N
6 C14 N15 C N sing 1.47 N N
7 C16 N15 C N sing 1.47 N N
8 C16 C17 C C sing 1.53 N N
9 C10 C09 C C doub 1.37 N Y
10 C10 C24 C C sing 1.41 N Y
11 C09 C08 C C sing 1.39 N Y
12 N25 C24 N C doub 1.34 N Y
13 N25 C03 N C sing 1.31 N Y
14 C24 C06 C C sing 1.42 N Y
15 N15 C23 N C sing 1.47 N N
16 C02 C03 C C sing 1.51 N N
17 C17 N18 C N sing 1.47 N N
18 C08 C07 C C doub 1.36 N Y
19 C03 C04 C C doub 1.39 N Y
20 C06 C07 C C sing 1.41 N Y
21 C06 C05 C C doub 1.41 N Y
22 C04 C05 C C sing 1.37 N Y
23 C23 C22 C C sing 1.53 N N
24 N18 C22 N C sing 1.47 N N
25 N18 C19 N C sing 1.47 N N
26 C19 C20 C C sing 1.47 N N
27 C20 C21 C C trip 1.17 N N
28 C02 H1 C H sing 1.09 N N
29 C02 H2 C H sing 1.09 N N
30 C04 H3 C H sing 1.08 N N
31 C05 H4 C H sing 1.08 N N
32 C07 H5 C H sing 1.08 N N
33 C08 H6 C H sing 1.08 N N
34 C09 H7 C H sing 1.08 N N
35 C12 H8 C H sing 1.09 N N
36 C12 H9 C H sing 1.09 N N
37 C13 H10 C H sing 1.09 N N
38 C13 H11 C H sing 1.09 N N
39 C14 H12 C H sing 1.09 N N
40 C14 H13 C H sing 1.09 N N
41 C16 H14 C H sing 1.09 N N
42 C16 H15 C H sing 1.09 N N
43 C17 H16 C H sing 1.09 N N
44 C17 H17 C H sing 1.09 N N
45 C19 H18 C H sing 1.09 N N
46 C19 H19 C H sing 1.09 N N
47 C21 H20 C H sing 1.05 N N
48 C22 H21 C H sing 1.09 N N
49 C22 H22 C H sing 1.09 N N
50 C23 H23 C H sing 1.09 N N
51 C23 H24 C H sing 1.09 N N
52 O01 H27 O H sing 0.97 N N