Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : JDW    

Bonds between two atoms of the molecule

Total Number of Bonds: 52


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C6 C5 C C sing 1.39 N Y
2 C6 C7 C C doub 1.36 N Y
3 C5 C4 C C doub 1.36 N Y
4 C7 C8 C C sing 1.4 N Y
5 C4 C3 C C sing 1.41 N Y
6 C8 C9 C C doub 1.41 N Y
7 C8 C3 C C sing 1.42 N Y
8 C9 C10 C C sing 1.37 N Y
9 C3 N1 C N doub 1.34 N Y
10 C10 C11 C C doub 1.39 N Y
11 N1 C11 N C sing 1.31 N Y
12 N1 C2 N C sing 1.46 N N
13 C11 C12 C C sing 1.51 N N
14 C2 C1 C C sing 1.53 N N
15 C22 C23 C C sing 1.53 N N
16 C22 N2 C N sing 1.47 N N
17 C12 C13 C C sing 1.51 N N
18 N2 C13 N C sing 1.31 N Y
19 N2 C16 N C doub 1.34 N Y
20 C13 C14 C C doub 1.39 N Y
21 C21 C16 C C sing 1.41 N Y
22 C21 C20 C C doub 1.36 N Y
23 C16 C17 C C sing 1.42 N Y
24 C20 C19 C C sing 1.39 N Y
25 C14 C15 C C sing 1.37 N Y
26 C17 C15 C C doub 1.41 N Y
27 C17 C18 C C sing 1.4 N Y
28 C19 C18 C C doub 1.36 N Y
29 C2 H1 C H sing 1.09 N N
30 C2 H2 C H sing 1.09 N N
31 C4 H3 C H sing 1.08 N N
32 C5 H4 C H sing 1.08 N N
33 C6 H5 C H sing 1.08 N N
34 C7 H6 C H sing 1.08 N N
35 C10 H7 C H sing 1.08 N N
36 C15 H8 C H sing 1.08 N N
37 C14 H9 C H sing 1.08 N N
38 C12 H10 C H sing 1.09 N N
39 C12 H11 C H sing 1.09 N N
40 C1 H12 C H sing 1.09 N N
41 C1 H13 C H sing 1.09 N N
42 C1 H14 C H sing 1.09 N N
43 C18 H15 C H sing 1.08 N N
44 C19 H16 C H sing 1.08 N N
45 C20 H17 C H sing 1.08 N N
46 C21 H18 C H sing 1.08 N N
47 C22 H19 C H sing 1.09 N N
48 C22 H20 C H sing 1.09 N N
49 C23 H21 C H sing 1.09 N N
50 C23 H22 C H sing 1.09 N N
51 C23 H23 C H sing 1.09 N N
52 C9 H24 C H sing 1.08 N N