Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : J6F    

Bonds between two atoms of the molecule

Total Number of Bonds: 38


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 S8 C8 S C doub 1.71 N N
2 CAJ N7 C N sing 1.46 N N
3 CAJ CAI C C sing 1.53 N N
4 C8 N7 C N sing 1.35 N N
5 C8 N9 C N sing 1.35 N N
6 N7 C5 N C sing 1.4 N N
7 CAI CAH C C sing 1.53 N N
8 CAH CAG C C sing 1.53 N N
9 N9 C4 N C sing 1.37 N N
10 C5 C4 C C doub 1.37 N N
11 C5 C6 C C sing 1.41 N N
12 CAG CAF C C sing 1.53 N N
13 C4 N3 C N sing 1.38 N N
14 O6 C6 O C doub 1.22 N N
15 C6 N1 C N sing 1.35 N N
16 N3 CAB N C sing 1.46 N N
17 N3 C2 N C sing 1.35 N N
18 CAF CAA C C sing 1.53 N N
19 N1 C2 N C sing 1.35 N N
20 C2 O2 C O doub 1.22 N N
21 N1 H1 N H sing 0.97 N N
22 CAA H2 C H sing 1.09 N N
23 CAA H3 C H sing 1.09 N N
24 CAA H4 C H sing 1.09 N N
25 CAF H5 C H sing 1.09 N N
26 CAF H6 C H sing 1.09 N N
27 CAG H7 C H sing 1.09 N N
28 CAG H8 C H sing 1.09 N N
29 CAH H9 C H sing 1.09 N N
30 CAH H10 C H sing 1.09 N N
31 CAI H11 C H sing 1.09 N N
32 CAI H12 C H sing 1.09 N N
33 CAJ H13 C H sing 1.09 N N
34 CAJ H14 C H sing 1.09 N N
35 CAB H15 C H sing 1.09 N N
36 CAB H16 C H sing 1.09 N N
37 CAB H17 C H sing 1.09 N N
38 N9 H18 N H sing 0.97 N N