Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : J54    

Bonds between two atoms of the molecule

Total Number of Bonds: 31


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O02 C06 O C doub 1.21 N N
2 C06 C05 C C sing 1.51 N N
3 C06 OXT C O sing 1.34 N N
4 C05 O18 C O sing 1.43 N N
5 C05 C04 C C sing 1.53 N N
6 C05 H05 C H sing 1.09 N N
7 O18 H18 O H sing 0.97 N N
8 C04 N02 C N sing 1.46 N N
9 C04 H041 C H sing 1.09 N N
10 C04 H042 C H sing 1.09 N N
11 N02 C03 N C sing 1.35 N N
12 N02 H02 N H sing 0.97 N N
13 C03 O01 C O doub 1.22 N N
14 C03 N01 C N sing 1.35 N N
15 N01 C02 N C sing 1.46 N N
16 N01 H01 N H sing 0.97 N N
17 C02 C01 C C sing 1.51 N N
18 C02 H021 C H sing 1.09 N N
19 C02 H022 C H sing 1.09 N N
20 C01 CE1 C C sing 1.38 N Y
21 C01 CE2 C C doub 1.38 N Y
22 CE1 CD1 C C doub 1.38 N Y
23 CE1 HE1 C H sing 1.08 N N
24 CD1 CG C C sing 1.38 N Y
25 CD1 HD1 C H sing 1.08 N N
26 CG CD2 C C doub 1.38 N Y
27 CG HG C H sing 1.08 N N
28 CD2 CE2 C C sing 1.38 N Y
29 CD2 HD2 C H sing 1.08 N N
30 CE2 HE2 C H sing 1.08 N N
31 OXT HOT O H sing 0.97 N N