Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : IS5    

Bonds between two atoms of the molecule

Total Number of Bonds: 67


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C24 C23 C C sing 1.53 N N
2 C24 C22 C C sing 1.53 N N
3 O10 C06 O C doub 1.21 N N
4 C23 C22 C C sing 1.53 N N
5 C23 C25 C C sing 1.51 N N
6 C22 C21 C C sing 1.53 N N
7 C31 C25 C C doub 1.38 N Y
8 C31 C30 C C sing 1.38 N Y
9 C06 N07 C N sing 1.34 N N
10 C06 C05 C C sing 1.51 N N
11 C21 O20 C O sing 1.45 N N
12 C25 C26 C C sing 1.38 N Y
13 C30 C29 C C doub 1.38 N Y
14 N07 C08 N C sing 1.47 N N
15 O32 C19 O C doub 1.22 N N
16 O20 C19 O C sing 1.35 N N
17 C26 C27 C C doub 1.38 N Y
18 C05 C04 C C sing 1.53 N N
19 C05 C09 C C sing 1.55 N N
20 C29 C27 C C sing 1.38 N Y
21 C19 N18 C N sing 1.35 N N
22 C27 F28 C F sing 1.35 N N
23 C16 C15 C C sing 1.53 N N
24 C08 C09 C C sing 1.54 N N
25 C04 C03 C C sing 1.53 N N
26 N18 C13 N C sing 1.46 N N
27 C13 C12 C C sing 1.51 N N
28 C13 C14 C C sing 1.53 N N
29 N11 C12 N C sing 1.35 N N
30 N11 C03 N C sing 1.46 N N
31 C15 C14 C C sing 1.53 N N
32 C15 C17 C C sing 1.53 N N
33 C12 O33 C O doub 1.21 N N
34 C03 C01 C C sing 1.51 N N
35 C01 O02 C O doub 1.21 N N
36 C13 H1 C H sing 1.09 N N
37 C15 H2 C H sing 1.09 N N
38 C16 H3 C H sing 1.09 N N
39 C16 H4 C H sing 1.09 N N
40 C16 H5 C H sing 1.09 N N
41 C17 H6 C H sing 1.09 N N
42 C17 H7 C H sing 1.09 N N
43 C17 H8 C H sing 1.09 N N
44 C01 H9 C H sing 1.08 N N
45 C03 H11 C H sing 1.09 N N
46 C04 H12 C H sing 1.09 N N
47 C04 H13 C H sing 1.09 N N
48 C05 H14 C H sing 1.09 N N
49 C08 H15 C H sing 1.09 N N
50 C08 H16 C H sing 1.09 N N
51 C09 H17 C H sing 1.09 N N
52 C09 H18 C H sing 1.09 N N
53 C14 H19 C H sing 1.09 N N
54 C14 H20 C H sing 1.09 N N
55 C21 H21 C H sing 1.09 N N
56 C21 H22 C H sing 1.09 N N
57 C22 H23 C H sing 1.09 N N
58 C23 H24 C H sing 1.09 N N
59 C24 H25 C H sing 1.09 N N
60 C24 H26 C H sing 1.09 N N
61 C26 H27 C H sing 1.08 N N
62 C29 H28 C H sing 1.08 N N
63 C30 H29 C H sing 1.08 N N
64 C31 H30 C H sing 1.08 N N
65 N07 H31 N H sing 0.97 N N
66 N11 H32 N H sing 0.97 N N
67 N18 H33 N H sing 0.97 N N