Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Chemical Bonds

 Molecule : HZY    

Bonds between two atoms of the molecule

Total Number of Bonds: 51


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CBA OAX C O sing 1.43 N N
2 OAX CAO O C sing 1.36 N N
3 CBB OAY C O sing 1.43 N N
4 OAY CAP O C sing 1.36 N N
5 CAO CAP C C doub 1.39 N Y
6 CAO CAN C C sing 1.39 N Y
7 CAP CAQ C C sing 1.39 N Y
8 OAW CAN O C sing 1.36 N N
9 OAW CAZ O C sing 1.43 N N
10 CAN CAM C C doub 1.39 N Y
11 CAQ CAL C C doub 1.38 N Y
12 CAM CAL C C sing 1.38 N Y
13 CAL CAK C C sing 1.51 N N
14 CAK NAI C N sing 1.47 N N
15 NAI CAJ N C doub 1.31 N Y
16 NAI CAH N C sing 1.33 N Y
17 CAJ CAF C C sing 1.4 N Y
18 CAA CAF C C doub 1.4 N Y
19 CAA CAB C C sing 1.36 N Y
20 CAF CAE C C sing 1.42 N Y
21 CAH CAG C C doub 1.36 N Y
22 CAB CAC C C doub 1.4 N Y
23 CAE CAG C C sing 1.41 N Y
24 CAE CAD C C doub 1.4 N Y
25 CAC CAD C C sing 1.37 N Y
26 CAC OAR C O sing 1.36 N N
27 OAR SAS O S sing 1.52 N N
28 NAV SAS N S sing 1.66 N N
29 OAU SAS O S doub 1.42 N N
30 SAS OAT S O doub 1.42 N N
31 CAZ H1 C H sing 1.09 N N
32 CAZ H2 C H sing 1.09 N N
33 CAZ H3 C H sing 1.09 N N
34 CAM H4 C H sing 1.08 N N
35 CBA H5 C H sing 1.09 N N
36 CBA H6 C H sing 1.09 N N
37 CBA H7 C H sing 1.09 N N
38 CBB H8 C H sing 1.09 N N
39 CBB H9 C H sing 1.09 N N
40 CBB H10 C H sing 1.09 N N
41 CAQ H11 C H sing 1.08 N N
42 CAK H12 C H sing 1.09 N N
43 CAK H13 C H sing 1.09 N N
44 CAJ H14 C H sing 1.08 N N
45 CAH H15 C H sing 1.08 N N
46 CAG H16 C H sing 1.08 N N
47 CAD H17 C H sing 1.08 N N
48 CAA H18 C H sing 1.08 N N
49 CAB H19 C H sing 1.08 N N
50 NAV H20 N H sing 0.97 N N
51 NAV H21 N H sing 0.97 N N