Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : HO5    

Bonds between two atoms of the molecule

Total Number of Bonds: 65


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 NBA CBB N C sing 1.34 N Y
2 NBA CAZ N C doub 1.3 N Y
3 CBB CBC C C doub 1.35 N Y
4 CAZ NAX C N sing 1.36 N Y
5 CBC NAX C N sing 1.37 N Y
6 NAX CAT N C sing 1.39 N N
7 CAT NAS C N doub 1.33 N Y
8 CAT NAU C N sing 1.33 N Y
9 NAS CAR N C sing 1.33 N Y
10 NAU CAV N C doub 1.33 N Y
11 NAQ CAR N C sing 1.38 N N
12 NAQ CAC N C sing 1.4 N N
13 CAR NAW C N doub 1.33 N Y
14 CAP CAB C C sing 1.51 N N
15 CAC CAB C C doub 1.39 N Y
16 CAC CAD C C sing 1.39 N Y
17 CAV NAW C N sing 1.33 N Y
18 CAV NAY C N sing 1.38 N N
19 CAB CAA C C sing 1.38 N Y
20 CAD CAE C C doub 1.39 N Y
21 CBG NAY C N sing 1.48 N N
22 CBG CBF C C sing 1.54 N N
23 NAY CBD N C sing 1.49 N N
24 CAA CAF C C doub 1.38 N Y
25 CAE CAF C C sing 1.4 N Y
26 CAE CAG C C sing 1.48 N N
27 OAI CAG O C doub 1.22 N N
28 FBK CBI F C sing 1.4 N N
29 CBD CBE C C sing 1.54 N N
30 CAG NAH C N sing 1.35 N N
31 CBF CBE C C sing 1.54 N N
32 CBF OBH C O sing 1.43 N N
33 CAK CAJ C C doub 1.39 N Y
34 CAK CAL C C sing 1.38 N Y
35 NAH CAJ N C sing 1.4 N N
36 CBI FBJ C F sing 1.4 N N
37 CBI CAL C C sing 1.51 N N
38 CBI FBL C F sing 1.4 N N
39 CAJ CAO C C sing 1.39 N Y
40 CAL CAM C C doub 1.38 N Y
41 CAO CAN C C doub 1.38 N Y
42 CAM CAN C C sing 1.38 N Y
43 CAA H1 C H sing 1.08 N N
44 CAD H2 C H sing 1.08 N N
45 CAF H3 C H sing 1.08 N N
46 CAK H4 C H sing 1.08 N N
47 CAM H5 C H sing 1.08 N N
48 CAN H6 C H sing 1.08 N N
49 CAO H7 C H sing 1.08 N N
50 CAP H8 C H sing 1.09 N N
51 CAP H9 C H sing 1.09 N N
52 CAP H10 C H sing 1.09 N N
53 CAZ H11 C H sing 1.08 N N
54 CBB H12 C H sing 1.08 N N
55 CBC H13 C H sing 1.08 N N
56 CBD H14 C H sing 1.09 N N
57 CBD H15 C H sing 1.09 N N
58 CBE H16 C H sing 1.09 N N
59 CBE H17 C H sing 1.09 N N
60 CBF H18 C H sing 1.09 N N
61 CBG H19 C H sing 1.09 N N
62 CBG H20 C H sing 1.09 N N
63 NAH H21 N H sing 0.97 N N
64 NAQ H22 N H sing 0.97 N N
65 OBH H23 O H sing 0.97 N N