Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
GVJ
Bonds between two atoms of the molecule
Total Number of Bonds: 41
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
N1
C2
N
C
sing
1.48
N
N
2
C2
C3
C
C
sing
1.52
N
N
3
C3
C4
C
C
sing
1.38
N
N
4
C4
C5
C
C
doub
1.39
N
N
5
C5
C6
C
C
sing
1.39
N
N
6
C6
C7
C
C
doub
1.4
N
N
7
C3
C8
C
C
doub
1.38
N
N
8
C7
C8
C
C
sing
1.39
N
N
9
C2
C9
C
C
sing
1.49
N
N
10
C9
C10
C
C
sing
1.39
N
N
11
C10
C11
C
C
doub
1.4
N
N
12
C11
C12
C
C
sing
1.4
N
N
13
C12
C13
C
C
doub
1.4
N
N
14
C9
C14
C
C
doub
1.39
N
N
15
C13
C14
C
C
sing
1.39
N
N
16
C12
C15
C
C
sing
1.43
N
N
17
C15
N16
C
N
sing
1.35
N
N
18
N16
C17
N
C
doub
1.36
N
N
19
C17
N18
C
N
sing
1.35
N
N
20
N18
C19
N
C
doub
1.34
N
N
21
C19
N20
C
N
sing
1.37
N
N
22
N20
C21
N
C
sing
1.37
N
N
23
C21
N22
C
N
doub
1.32
N
N
24
C15
C23
C
C
doub
1.39
N
N
25
C19
C23
C
C
sing
1.39
N
N
26
N22
C23
N
C
sing
1.37
N
N
27
N1
H1N1
N
H
sing
0.99
N
N
28
N1
H1N2
N
H
sing
0.99
N
N
29
C2
H2
C
H
sing
1.11
N
N
30
C4
H4
C
H
sing
1.09
N
N
31
C8
H8
C
H
sing
1.09
N
N
32
C5
H5
C
H
sing
1.09
N
N
33
C6
H6
C
H
sing
1.09
N
N
34
C7
H7
C
H
sing
1.09
N
N
35
C10
H10
C
H
sing
1.09
N
N
36
C14
H14
C
H
sing
1.09
N
N
37
C11
H11
C
H
sing
1.09
N
N
38
C13
H13
C
H
sing
1.09
N
N
39
C17
H17
C
H
sing
1.08
N
N
40
N20
H20
N
H
sing
1.01
N
N
41
C21
H21
C
H
sing
1.08
N
N