Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : GAH    

Bonds between two atoms of the molecule

Total Number of Bonds: 119


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C6 C C sing 1.53 N N
2 C1 C2 C C sing 1.53 N N
3 C1 H11A C H sing 1.09 N N
4 C1 H12 C H sing 1.09 N N
5 C6 C7 C C sing 1.53 N N
6 C6 C5 C C sing 1.53 N N
7 C6 H6 C H sing 1.09 N N
8 C7 N8 C N sing 1.46 N N
9 C7 H71 C H sing 1.09 N N
10 C7 H72 C H sing 1.09 N N
11 N8 C9 N C sing 1.38 N N
12 N8 HN8 N H sing 0.97 N N
13 C9 N11 C N doub 1.3 N N
14 C9 N10 C N sing 1.37 N N
15 N11 H11 N H sing 0.97 N N
16 N10 H101 N H sing 0.97 N N
17 N10 H102 N H sing 0.97 N N
18 C5 C4 C C sing 1.53 N N
19 C5 H51 C H sing 1.09 N N
20 C5 H52A C H sing 1.09 N N
21 C4 C3 C C sing 1.53 N N
22 C4 H41 C H sing 1.09 N N
23 C4 H42 C H sing 1.09 N N
24 C3 C12 C C sing 1.51 N N
25 C3 C2 C C sing 1.53 N N
26 C3 H3 C H sing 1.09 N N
27 C12 N14 C N sing 1.35 N N
28 C12 O13 C O doub 1.21 N N
29 N14 C15 N C sing 1.46 N N
30 N14 H14 N H sing 0.97 N N
31 C15 C17 C C sing 1.51 N N
32 C15 C16 C C sing 1.53 N N
33 C15 H15 C H sing 1.09 N N
34 C17 N25 C N sing 1.35 N N
35 C17 O24 C O doub 1.21 N N
36 N25 C28 N C sing 1.47 N N
37 N25 C26 N C sing 1.47 N N
38 C28 C29 C C sing 1.51 N N
39 C28 C27 C C sing 1.54 N N
40 C28 H28 C H sing 1.09 N N
41 C29 N31 C N sing 1.35 N N
42 C29 O30 C O doub 1.21 N N
43 N31 C32 N C sing 1.46 N N
44 N31 H31 N H sing 0.97 N N
45 C32 C41 C C sing 1.51 N N
46 C32 C33 C C sing 1.53 N N
47 C32 H32 C H sing 1.09 N N
48 C41 N43 C N sing 1.35 N N
49 C41 O42 C O doub 1.21 N N
50 N43 C44 N C sing 1.47 N N
51 N43 H43 N H sing 0.97 N N
52 C44 C48 C C sing 1.53 N N
53 C44 C45 C C sing 1.51 N N
54 C44 H44 C H sing 1.09 N N
55 C48 C49 C C sing 1.53 N N
56 C48 H481 C H sing 1.09 N N
57 C48 H482 C H sing 1.09 N N
58 C49 C50 C C sing 1.53 N N
59 C49 H491 C H sing 1.09 N N
60 C49 H492 C H sing 1.09 N N
61 C50 C51 C C sing 1.53 N N
62 C50 H501 C H sing 1.09 N N
63 C50 H502 C H sing 1.09 N N
64 C51 N52 C N sing 1.47 N N
65 C51 H511 C H sing 1.09 N N
66 C51 H512 C H sing 1.09 N N
67 N52 C53 N C sing 1.37 N N
68 N52 H52 N H sing 0.97 N N
69 C53 N55 C N doub 1.3 N N
70 C53 N54 C N sing 1.37 N N
71 N55 H55 N H sing 0.97 N N
72 N54 H541 N H sing 0.97 N N
73 N54 H542 N H sing 0.97 N N
74 C45 N47 C N sing 1.35 N N
75 C45 O46 C O doub 1.21 N N
76 N47 H471 N H sing 0.97 N N
77 N47 H472 N H sing 0.97 N N
78 C33 C34 C C sing 1.51 N N
79 C33 H331 C H sing 1.09 N N
80 C33 H332 C H sing 1.09 N N
81 C27 C26 C C sing 1.54 N N
82 C27 H271 C H sing 1.09 N N
83 C27 H272 C H sing 1.09 N N
84 C26 H261 C H sing 1.09 N N
85 C26 H262 C H sing 1.09 N N
86 C16 C18 C C sing 1.53 N N
87 C16 H161 C H sing 1.09 N N
88 C16 H162 C H sing 1.09 N N
89 C2 H21 C H sing 1.09 N N
90 C2 H22 C H sing 1.09 N N
91 C18 C23 C C sing 1.53 N N
92 C18 C19 C C sing 1.53 N N
93 C18 H18 C H sing 1.09 N N
94 C23 C22 C C sing 1.53 N N
95 C23 H231 C H sing 1.09 N N
96 C23 H232 C H sing 1.09 N N
97 C22 C21 C C sing 1.53 N N
98 C22 H221 C H sing 1.09 N N
99 C22 H222 C H sing 1.09 N N
100 C21 C20 C C sing 1.53 N N
101 C21 H211 C H sing 1.09 N N
102 C21 H212 C H sing 1.09 N N
103 C20 C19 C C sing 1.53 N N
104 C20 H201 C H sing 1.09 N N
105 C20 H202 C H sing 1.09 N N
106 C19 H191 C H sing 1.09 N N
107 C19 H192 C H sing 1.09 N N
108 C34 C39 C C doub 1.38 N Y
109 C34 C35 C C sing 1.38 N Y
110 C39 C38 C C sing 1.38 N Y
111 C39 H39 C H sing 1.08 N N
112 C38 C37 C C doub 1.39 N Y
113 C38 H38 C H sing 1.08 N N
114 C37 O40 C O sing 1.36 N N
115 C37 C36 C C sing 1.39 N Y
116 O40 H40 O H sing 0.97 N N
117 C36 C35 C C doub 1.38 N Y
118 C36 H36 C H sing 1.08 N N
119 C35 H35 C H sing 1.08 N N