Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : EOI    

Bonds between two atoms of the molecule

Total Number of Bonds: 44


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C C1 C C sing 1.53 N N
2 C H C H sing 1.09 N N
3 C HA C H sing 1.09 N N
4 C HB C H sing 1.09 N N
5 C2 N C N sing 1.46 N N
6 N C3 N C sing 1.36 N Y
7 N C5 N C sing 1.37 N Y
8 C8 O C O sing 1.43 N N
9 O C1 O C sing 1.43 N N
10 C8 P C P sing 1.82 N N
11 S P S P sing 2.12 N N
12 P O2 P O sing 1.61 N N
13 P O1 P O doub 1.48 N N
14 S HS S H sing 1.34 N N
15 C1 C2 C C sing 1.53 N N
16 C1 H1 C H sing 1.09 N N
17 C3 N1 C N doub 1.3 N Y
18 N1 C4 N C sing 1.35 N Y
19 O5 P1 O P sing 1.61 N N
20 O3 P1 O P doub 1.48 N N
21 O2 P1 O P sing 1.61 N N
22 P1 O4 P O sing 1.61 N N
23 C2 H2 C H sing 1.09 N N
24 C2 H2A C H sing 1.09 N N
25 N2 C5 N C sing 1.33 N Y
26 N2 C6 N C doub 1.32 N Y
27 O8 P2 O P doub 1.48 N N
28 O6 P2 O P sing 1.61 N N
29 P2 O7 P O sing 1.61 N N
30 P2 O5 P O sing 1.61 N N
31 C3 H3 C H sing 1.08 N N
32 C6 N3 C N sing 1.32 N Y
33 N3 C7 N C doub 1.33 N Y
34 C5 C4 C C doub 1.4 N Y
35 C4 C7 C C sing 1.41 N Y
36 C7 N4 C N sing 1.38 N N
37 N4 HN4 N H sing 0.97 N N
38 N4 HN4A N H sing 0.97 N N
39 O4 HO4 O H sing 0.97 N N
40 C6 H6 C H sing 1.08 N N
41 O6 HO6 O H sing 0.97 N N
42 O7 HO7 O H sing 0.97 N N
43 C8 H8 C H sing 1.09 N N
44 C8 H8A C H sing 1.09 N N