Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
DX6
Bonds between two atoms of the molecule
Total Number of Bonds: 35
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
CAF
CAD
C
C
doub
1.38
N
Y
2
CAF
CAN
C
C
sing
1.38
N
Y
3
CAD
CAC
C
C
sing
1.38
N
Y
4
CAC
CAE
C
C
doub
1.38
N
Y
5
CAE
CAG
C
C
sing
1.38
N
Y
6
CAG
CAN
C
C
doub
1.38
N
Y
7
CAN
CAI
C
C
sing
1.51
N
N
8
CAI
CAJ
C
C
sing
1.53
N
N
9
CAJ
CAP
C
C
sing
1.51
N
N
10
CAP
CAH
C
C
doub
1.34
N
Y
11
CAP
CAS
C
C
sing
1.46
N
Y
12
CAH
NAL
C
N
sing
1.37
N
Y
13
NAL
CAR
N
C
sing
1.36
N
Y
14
CAR
NAK
C
N
sing
1.34
N
N
15
CAR
CAS
C
C
doub
1.4
N
Y
16
NAK
CAO
N
C
doub
1.31
N
N
17
CAS
CAQ
C
C
sing
1.41
N
N
18
CAQ
OAB
C
O
doub
1.22
N
N
19
CAQ
NAM
C
N
sing
1.35
N
N
20
NAM
CAO
N
C
sing
1.36
N
N
21
CAO
NAA
C
N
sing
1.37
N
N
22
CAF
HAF
C
H
sing
1.08
N
N
23
CAD
HAD
C
H
sing
1.08
N
N
24
CAC
HAC
C
H
sing
1.08
N
N
25
CAE
HAE
C
H
sing
1.08
N
N
26
CAG
HAG
C
H
sing
1.08
N
N
27
CAI
HAI
C
H
sing
1.09
N
N
28
CAI
HAIA
C
H
sing
1.09
N
N
29
CAJ
HAJ
C
H
sing
1.09
N
N
30
CAJ
HAJA
C
H
sing
1.09
N
N
31
CAH
HAH
C
H
sing
1.08
N
N
32
NAL
HNAL
N
H
sing
0.97
N
N
33
NAM
HNAM
N
H
sing
0.97
N
N
34
NAA
HNAA
N
H
sing
0.97
N
N
35
NAA
HNAB
N
H
sing
0.97
N
N