Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : D58    

Bonds between two atoms of the molecule

Total Number of Bonds: 51


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N4 C10 N C sing 1.35 N N
2 C10 O1 C O doub 1.22 N N
3 C10 C9 C C sing 1.47 N N
4 C8 C9 C C doub 1.39 N Y
5 C8 N3 C N sing 1.32 N Y
6 C9 C11 C C sing 1.42 N Y
7 N3 C7 N C doub 1.32 N Y
8 C11 S1 C S sing 1.76 N Y
9 C11 C14 C C doub 1.4 N Y
10 C7 C14 C C sing 1.42 N Y
11 C7 N2 C N sing 1.38 N N
12 S1 C12 S C sing 1.75 N Y
13 C14 C13 C C sing 1.45 N Y
14 C5 C4 C C sing 1.53 N N
15 C5 C6 C C sing 1.53 N N
16 N2 C6 N C sing 1.47 N N
17 C4 C3 C C sing 1.53 N N
18 C6 C2 C C sing 1.53 N N
19 C13 C12 C C doub 1.33 N Y
20 C12 C15 C C sing 1.48 N N
21 C3 N1 C N sing 1.47 N N
22 C20 C15 C C doub 1.4 N Y
23 C20 C19 C C sing 1.38 N Y
24 C15 C16 C C sing 1.4 N Y
25 C2 N1 C N sing 1.47 N N
26 C2 C1 C C sing 1.53 N N
27 C19 C18 C C doub 1.38 N Y
28 C16 C17 C C doub 1.38 N Y
29 C18 C17 C C sing 1.38 N Y
30 C1 H1 C H sing 1.09 N N
31 C1 H2 C H sing 1.09 N N
32 C1 H3 C H sing 1.09 N N
33 C2 H4 C H sing 1.09 N N
34 C3 H5 C H sing 1.09 N N
35 C3 H6 C H sing 1.09 N N
36 C8 H7 C H sing 1.08 N N
37 C13 H8 C H sing 1.08 N N
38 C16 H9 C H sing 1.08 N N
39 C19 H10 C H sing 1.08 N N
40 C20 H11 C H sing 1.08 N N
41 N1 H12 N H sing 1.01 N N
42 C4 H14 C H sing 1.09 N N
43 C4 H15 C H sing 1.09 N N
44 C5 H16 C H sing 1.09 N N
45 C5 H17 C H sing 1.09 N N
46 C6 H18 C H sing 1.09 N N
47 N2 H19 N H sing 0.97 N N
48 N4 H20 N H sing 0.97 N N
49 N4 H21 N H sing 0.97 N N
50 C17 H22 C H sing 1.08 N N
51 C18 H23 C H sing 1.08 N N