Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : C8E    

Bonds between two atoms of the molecule

Total Number of Bonds: 54


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C sing 1.53 N N
2 C1 H11 C H sing 1.09 N N
3 C1 H12 C H sing 1.09 N N
4 C1 H13 C H sing 1.09 N N
5 C2 C3 C C sing 1.53 N N
6 C2 H21 C H sing 1.09 N N
7 C2 H22 C H sing 1.09 N N
8 C3 C4 C C sing 1.53 N N
9 C3 H31 C H sing 1.09 N N
10 C3 H32 C H sing 1.09 N N
11 C4 C5 C C sing 1.53 N N
12 C4 H41 C H sing 1.09 N N
13 C4 H42 C H sing 1.09 N N
14 C5 C6 C C sing 1.53 N N
15 C5 H51 C H sing 1.09 N N
16 C5 H52 C H sing 1.09 N N
17 C6 C7 C C sing 1.53 N N
18 C6 H61 C H sing 1.09 N N
19 C6 H62 C H sing 1.09 N N
20 C7 C8 C C sing 1.53 N N
21 C7 H71 C H sing 1.09 N N
22 C7 H72 C H sing 1.09 N N
23 C8 O9 C O sing 1.43 N N
24 C8 H81 C H sing 1.09 N N
25 C8 H82 C H sing 1.09 N N
26 O9 C10 O C sing 1.43 N N
27 C10 C11 C C sing 1.53 N N
28 C10 H101 C H sing 1.09 N N
29 C10 H102 C H sing 1.09 N N
30 C11 O12 C O sing 1.43 N N
31 C11 H111 C H sing 1.09 N N
32 C11 H112 C H sing 1.09 N N
33 O12 C13 O C sing 1.43 N N
34 C13 C14 C C sing 1.53 N N
35 C13 H131 C H sing 1.09 N N
36 C13 H132 C H sing 1.09 N N
37 C14 O15 C O sing 1.43 N N
38 C14 H141 C H sing 1.09 N N
39 C14 H142 C H sing 1.09 N N
40 O15 C16 O C sing 1.43 N N
41 C16 C17 C C sing 1.53 N N
42 C16 H161 C H sing 1.09 N N
43 C16 H162 C H sing 1.09 N N
44 C17 O18 C O sing 1.43 N N
45 C17 H171 C H sing 1.09 N N
46 C17 H172 C H sing 1.09 N N
47 O18 C19 O C sing 1.43 N N
48 C19 C20 C C sing 1.53 N N
49 C19 H191 C H sing 1.09 N N
50 C19 H192 C H sing 1.09 N N
51 C20 O21 C O sing 1.43 N N
52 C20 H201 C H sing 1.09 N N
53 C20 H202 C H sing 1.09 N N
54 O21 HO2 O H sing 0.97 N N