Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : BSM    

Bonds between two atoms of the molecule

Total Number of Bonds: 47


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C22 O21 C O sing 1.43 N N
2 C22 H221 C H sing 1.09 N N
3 C22 H222 C H sing 1.09 N N
4 C22 H223 C H sing 1.09 N N
5 O21 C18 O C sing 1.36 N N
6 C18 C19 C C doub 1.39 N Y
7 C18 C17 C C sing 1.39 N Y
8 C19 C20 C C sing 1.38 N Y
9 C19 H19 C H sing 1.08 N N
10 C20 C7 C C doub 1.4 N Y
11 C20 H20 C H sing 1.08 N N
12 C17 C16 C C doub 1.38 N Y
13 C17 H17 C H sing 1.08 N N
14 C16 C7 C C sing 1.39 N Y
15 C16 H16 C H sing 1.08 N N
16 C7 C3 C C sing 1.48 N Y
17 C3 C2 C C sing 1.42 N Y
18 C3 C4 C C doub 1.39 N Y
19 C2 C8 C C sing 1.48 N N
20 C2 N1 C N doub 1.32 N Y
21 C8 O9 C O doub 1.22 N N
22 C8 N10 C N sing 1.35 N N
23 N10 C26 N C sing 1.47 N N
24 N10 H10 N H sing 0.97 N N
25 C26 C27 C C sing 1.53 N N
26 C26 H261 C H sing 1.09 N N
27 C26 H262 C H sing 1.09 N N
28 C27 H271 C H sing 1.09 N N
29 C27 H272 C H sing 1.09 N N
30 C27 H273 C H sing 1.09 N N
31 N1 N5 N N sing 1.28 N Y
32 N5 C4 N C sing 1.36 N Y
33 N5 H5 N H sing 0.97 N N
34 C4 C6 C C sing 1.48 N Y
35 C6 C11 C C doub 1.4 N Y
36 C6 C15 C C sing 1.4 N Y
37 C11 C12 C C sing 1.38 N Y
38 C11 H11 C H sing 1.08 N N
39 C12 CL25 C CL sing 1.74 N N
40 C12 C13 C C doub 1.39 N Y
41 C13 O24 C O sing 1.36 N N
42 C13 C14 C C sing 1.39 N Y
43 O24 H24 O H sing 0.97 N N
44 C14 C15 C C doub 1.38 N Y
45 C14 H14 C H sing 1.08 N N
46 C15 O23 C O sing 1.36 N N
47 O23 H23 O H sing 0.97 N N