Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : BD3    

Bonds between two atoms of the molecule

Total Number of Bonds: 64


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C2 C1 C C doub 1.38 N Y
2 C1 C14 C C sing 1.51 N N
3 C1 C3 C C sing 1.38 N Y
4 C4 C2 C C sing 1.38 N Y
5 C2 H2 C H sing 1.08 N N
6 C5 C3 C C doub 1.4 N Y
7 C3 H3 C H sing 1.08 N N
8 C4 C6 C C doub 1.38 N Y
9 C4 H4 C H sing 1.08 N N
10 C6 C5 C C sing 1.4 N Y
11 C5 C7 C C sing 1.48 N Y
12 C6 H6 C H sing 1.08 N N
13 O11 C7 O C sing 1.35 N Y
14 C7 N8 C N doub 1.32 N Y
15 C12 N13 C N doub 1.3 N N
16 C12 C10 C C sing 1.47 N N
17 C12 H12 C H sing 1.08 N N
18 N13 HN13 N H sing 0.97 N N
19 C15 N16 C N sing 1.46 N N
20 C15 C14 C C sing 1.53 N N
21 C15 C20 C C sing 1.51 N N
22 C15 H15 C H sing 1.09 N N
23 O19 C17 O C doub 1.22 N N
24 C17 C18 C C sing 1.47 N N
25 C17 N16 C N sing 1.35 N N
26 N26 C18 N C sing 1.37 N Y
27 C18 C29 C C doub 1.38 N Y
28 N22 C20 N C sing 1.35 N N
29 N22 C23 N C sing 1.47 N N
30 N22 HN22 N H sing 0.97 N N
31 C23 C24 C C sing 1.51 N N
32 C23 H23 C H sing 1.09 N N
33 C23 H23A C H sing 1.09 N N
34 C24 N25 C N doub 1.28 N N
35 C24 H24 C H sing 1.08 N N
36 C30 N26 C N sing 1.46 N N
37 C30 H30 C H sing 1.09 N N
38 C30 H30A C H sing 1.09 N N
39 C30 H30B C H sing 1.09 N N
40 C28 C31 C C sing 1.51 N N
41 C33 C31 C C sing 1.53 N N
42 C31 C34 C C sing 1.53 N N
43 C31 C32 C C sing 1.53 N N
44 C32 H32 C H sing 1.09 N N
45 C32 H32A C H sing 1.09 N N
46 C32 H32B C H sing 1.09 N N
47 C33 H33 C H sing 1.09 N N
48 C33 H33A C H sing 1.09 N N
49 C33 H33B C H sing 1.09 N N
50 C34 H34 C H sing 1.09 N N
51 C34 H34A C H sing 1.09 N N
52 C34 H34B C H sing 1.09 N N
53 N25 HN25 N H sing 0.97 N N
54 C20 O21 C O doub 1.21 N N
55 N16 HN16 N H sing 0.97 N N
56 C28 C29 C C sing 1.4 N Y
57 C29 H29 C H sing 1.08 N N
58 N27 C28 N C doub 1.31 N Y
59 N26 N27 N N sing 1.28 N Y
60 C14 H14 C H sing 1.09 N N
61 C14 H14A C H sing 1.09 N N
62 O11 C10 O C sing 1.35 N Y
63 C10 N9 C N doub 1.32 N Y
64 N8 N9 N N sing 1.29 N Y