Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : AT1    

Bonds between two atoms of the molecule

Total Number of Bonds: 40


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N C1 N C sing 1.47 N N
2 N H2 N H sing 1.01 N N
3 N H3 N H sing 1.01 N N
4 C C1 C C sing 1.53 N N
5 C C6 C C sing 1.51 N N
6 C H5 C H sing 1.09 N N
7 C H6 C H sing 1.09 N N
8 O C2 O C sing 1.34 N N
9 O H1 O H sing 0.97 N N
10 C1 C2 C C sing 1.51 N N
11 C1 H4 C H sing 1.09 N N
12 C2 O1 C O doub 1.21 N N
13 O2 N1 O N sing 1.21 N Y
14 O2 C7 O C sing 1.34 N Y
15 O3 C4 O C sing 1.43 N N
16 O3 C5 O C sing 1.36 N N
17 N1 C5 N C doub 1.31 N Y
18 C3 C7 C C sing 1.51 N N
19 C3 C9 C C sing 1.53 N N
20 C3 C10 C C sing 1.53 N N
21 C3 C11 C C sing 1.53 N N
22 C4 P C P sing 1.82 N N
23 C4 H7 C H sing 1.09 N N
24 C4 H8 C H sing 1.09 N N
25 C5 C6 C C sing 1.42 N Y
26 C6 C7 C C doub 1.35 N Y
27 C9 H11 C H sing 1.09 N N
28 C9 H12 C H sing 1.09 N N
29 C9 H13 C H sing 1.09 N N
30 C10 H14 C H sing 1.09 N N
31 C10 H15 C H sing 1.09 N N
32 C10 H16 C H sing 1.09 N N
33 C11 H17 C H sing 1.09 N N
34 C11 H18 C H sing 1.09 N N
35 C11 H19 C H sing 1.09 N N
36 P O4 P O doub 1.48 N N
37 P O5 P O sing 1.61 N N
38 P O6 P O sing 1.61 N N
39 O5 H9 O H sing 0.97 N N
40 O6 H10 O H sing 0.97 N N