Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : AQ6    

Bonds between two atoms of the molecule

Total Number of Bonds: 76


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 OAW CAP O C doub 1.22 N N
2 CAP OBB C O sing 1.35 N N
3 CAP CAR C C sing 1.47 N N
4 CBA CAR C C doub 1.4 N Y
5 CBA CBD C C sing 1.37 N Y
6 CAR CAZ C C sing 1.4 N Y
7 CBD CAY C C doub 1.39 N Y
8 CAZ CBC C C doub 1.37 N Y
9 CAY CBC C C sing 1.39 N Y
10 CAY NAO C N sing 1.39 N N
11 NAO CAF N C sing 1.39 N N
12 OAQ CAG O C doub 1.22 N N
13 CAF CAI C C doub 1.39 N Y
14 CAF CAB C C sing 1.4 N Y
15 CAI CAE C C sing 1.38 N Y
16 CAG CAB C C sing 1.47 N N
17 CAG CAL C C sing 1.48 N N
18 CAS NAM C N sing 1.47 N N
19 CAS CAV C C sing 1.53 N N
20 CAB CAA C C doub 1.41 N Y
21 CAE NAM C N sing 1.39 N N
22 CAE CAC C C doub 1.41 N Y
23 NAM CAT N C sing 1.47 N N
24 NAN CAV N C sing 1.47 N N
25 NAN CAU N C sing 1.47 N N
26 NAN CAX N C sing 1.47 N N
27 CAT CAU C C sing 1.53 N N
28 CBF CAL C C doub 1.39 N Y
29 CBF CBI C C sing 1.38 N Y
30 CAL CAK C C sing 1.41 N Y
31 CBG CBK C C sing 1.53 N N
32 CBG CAX C C sing 1.53 N N
33 CBK CBM C C sing 1.53 N N
34 CAA CAC C C sing 1.39 N Y
35 CAA CAD C C sing 1.47 N N
36 CAC NAH C N sing 1.39 N N
37 CAX CBH C C sing 1.53 N N
38 CBI CBJ C C doub 1.38 N Y
39 CAK CAD C C sing 1.48 N N
40 CAK CBE C C doub 1.39 N Y
41 CAD OAJ C O doub 1.22 N N
42 CBM CBL C C sing 1.53 N N
43 CBJ CBE C C sing 1.38 N Y
44 CBH CBL C C sing 1.53 N N
45 CBG H1 C H sing 1.09 N N
46 CBG H2 C H sing 1.09 N N
47 CBK H3 C H sing 1.09 N N
48 CBK H4 C H sing 1.09 N N
49 CBM H5 C H sing 1.09 N N
50 CBM H6 C H sing 1.09 N N
51 CBL H7 C H sing 1.09 N N
52 CBL H8 C H sing 1.09 N N
53 CBH H9 C H sing 1.09 N N
54 CBH H10 C H sing 1.09 N N
55 CAX H11 C H sing 1.09 N N
56 CAU H13 C H sing 1.09 N N
57 CAU H14 C H sing 1.09 N N
58 CAT H15 C H sing 1.09 N N
59 CAT H16 C H sing 1.09 N N
60 CAV H17 C H sing 1.09 N N
61 CAV H18 C H sing 1.09 N N
62 CAS H19 C H sing 1.09 N N
63 CAS H20 C H sing 1.09 N N
64 CAI H21 C H sing 1.08 N N
65 NAH H22 N H sing 0.97 N N
66 NAH H23 N H sing 0.97 N N
67 CBE H24 C H sing 1.08 N N
68 CBJ H25 C H sing 1.08 N N
69 CBI H26 C H sing 1.08 N N
70 CBF H27 C H sing 1.08 N N
71 NAO H28 N H sing 0.97 N N
72 CBD H29 C H sing 1.08 N N
73 CBA H30 C H sing 1.08 N N
74 OBB H31 O H sing 0.97 N N
75 CAZ H32 C H sing 1.08 N N
76 CBC H33 C H sing 1.08 N N